XLOC_036631


Basic Information

Item Value
gene id XLOC_036631
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 39614757 ~ 39619132 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072507
ATACCTTAGGCTGGGCTCGCCGAGGGAAGGCAACTTTTGGGTCGATCTAGAAAAGAGTTTGAGAGGAGAAGGTCCAAGTTTAGAAATTCTGGAGAAAGAAGAACACTGACAGCAGCACAGAGCCGACTGGGACTGTAAATGAGAGCATCAGTCAGAAGCTCTGctgctttctctttactttttttttttaactgtactgTCGGAGAAGAGTGATCATGGTACATTCATACATGCAGAGTTTAGGGAAGAACAAGACTAATGACAGAAGTGAAACGAGATGCAGATTCATCTGATGAGAGAACAACAGTGACAGAGAAAAGCTATGAAGATGAGAATGACGTTCGGTTTACACTGACAGTGATTTTATTGCTGGATGACATCAGGttgatgtgttgttgttgttgatagtAATATAATTAGTGACCTGTGTGGTTGGCTGTAGCATCTCAaataaaatgcaagtaaaaataatatatatatatattgcagaTATTTTTAATGGGCATTATGCAACGACGCATCTGAGgtctttgaaaatgaaaatgacttTATTTCTGAGGTTTTTTCAAGAGTAATGACAGTGAAATATGATCAGAATCCAATTAGTTAAATAGCATTCATTCAGTTGTTTAAGCATGAAAGAAGTTGAAAGATGTTTAAATGTAGGGATGGGAAAATACTGGACCAAAAACCAGTATTTGTCTAAAAAGGCACGTAATTGTGTTGATACTGGAGTACCAGTAATCTTTAGGACAAATGCTACTGTCAATGATAGCCGAGCTGGTTTGTTTCCATATAGTTTGGTGTGAATGGCGAACTAGAAGCTGCTGCTTATCATTTTATGTCCCTCAAAGATGTCATCATGCGACTGATGaattagaattgttttttttttgctgtaattatGAGCTTATCCAGGGTGGGATGTCGGGAAATGAACATGCAGTAGTGTAATAGTGAACATTAGTAATATAATAAAACTCACAAAACATGCCATTCAACTGTAAATACACATACCACTGTGTTTAGTTATATTTGTCTCCATATTTTACGCCTCCACTTCTGTTTGCTAACAGTAATGAAATTGCTTATatcttaaaaaaatctttttgcaTCGAATGATAGACAATAGTAATGTAACTGTATTGATACGAGCCACTATTGATAAGTGATATCAGAATTATTATTGATAtcaataaaatttaaacaatacCCATCCTAAATGTAAATTTAGATATTATCAAAGTTAAAACAAGTGTGGCCCATCAAATGTAAACAATAGCATTTATTTACTGTCACTTTATagagaaatatatataaactcactggccactttattaggtacacctgtccaactgctcattaatgcaaatttctaatcagccaatcacatggcagcaactcaatacatttagacaTGATAAAGATGTCAAAATGTATTgacagttcaaaccaagcatcagaatggtggACGAAGGGtgatttaagttaatttaaacatggcatggttgttggtgccagacaggctggtctgagtattttagaaactgatctatggggattttcatgcacaaccaactatggattacagagaatggtctgaaaaagagaaaatatgcagtgagcggcGGAGAATAgaggaggagaatggccagactaagtcaatatggaccaaaatctctgaggaatatttccagtaccttgttgaatctatgccacgaaggattaaggcagttctgaaggcaaaagagggtttAACCccgtactagtaatgtgtacctaataaagtggccggtgagtctacatcacttttaataaatgaaaaaataaacaagatatAGTACTTTTATCATCTACAACATTCATCACTGTCATCCAGCAAACTCCATCTGGCATGATCTCTGTCAGTGTGAAcaaccattaaataaaaaaataagtaaatattcaaatgaaatgaaaagttTACAGATTTCTATGAGAGGCAAGTGGACATGAAGGAGTTTGACTGGACAGATGAGGCTGTCGTGGCCATCTGTGACTGCAAACATCACCggacaacaggaaaaaaaagaaaaaaaaaacatcacaaccAAAATAAAAGTAGAAAAACATCCTTAACCCACACACTCTTCTGACAGccaaacaaaactattttgtttgtttgtgtttgtttgtttttgcatgtcTTTCTTACTTCCGACTTATCTAAATGAAAAAATGACAAGTAAATCATCAAAAACAGTATGTCAAGCACTCTTAAAAATACTCTATATTTGAATTGAAAACAATGAAGTCGCTAAAAGCTTGCAGATGTGTAAATGAAGCAACAACACCTTCAGAAGTGCAGAAAACTTGATGTTGATTCGGCGCCAGTTTCAACAGTAGACAAAACTAGATTACAGAAACTCAAGATACTATATATTAGTCTATAGTCTAGTCCATCTATTGACCAAATGCTAGTCTACGTCATGCTGTACTGAGGTTAAACTCTAGAAGACAGTGAAGGCAGTACAGCACTAGCAGCGATAATGATTAGTCTCTTTCAAATAGAGCTACGCTAAAGAGCTAGCATTTTTGAGGTAAACGACAGCAGTTGTCCAGCGTCGTTTCCTTACACGAGACTACGAGAGTTTCTTTTGTGAAACTATAGAGAGTAAAAATGAAGAGGCTAGGCTAATCTGAACAGAGATCTGATGCAGAAACTACGGTTTTATGGCTAGTTTTTCTAGACTACTCTGATAGTCACCTCCGGTCCACAACATTGCTGAGGCTGCACCACTCCTGCGCACAAtcaaaaacaaacagacacacacacacaaacaaacaaaatcaacatACAGCCAGCGACGCACATGAGAGGAAAGCAACTGAGAATAAAATGTATGGTCACGTGAGACACATTCTTGtcattaaatttgttttttaatcccTTCGGACTCCCATGTCAGTCAGCCCATGTTTTTTGTGGTTTTTGAGCATTTAATTTAAAGCCTGCAGTCCATGAGAGTGGAATATTGTCATCCAATCAAATGGTGGTAAGGCTCAGCATGTTGTCGTTTGAATAAGATCCTCTACACTGAAAAGCACCATATACCACATTTCCaatgtttttattcagatttattgatATGTTTGCCAATATTTCATAGATTGTATGTAAAAAATAGGGATTGcacttactttttaaaaattaaaatcttttgtaacattgcAAGCTTTAGATTAggtttttttcaaatatgtctgACCATTAGGATGTTCAATGTGTTCAAGATCTGTTACTGAAAGTAAATCTCCAGCAATGCTGattgaacttttttatttaaaaaaaaaaattatatcgaTGTACTAATTCATTGCTGAAACAATTTCAAATGCAGAATAGGGACGCTCTGATCGATCGGCCGAGGATTGTTatcagccgataatcacatttaatgactcaaTCGTTCTCGCATATCACATGAACCGATGGTAAGtggtttacaagcagaggaaggtGCATTTTAAATGTTAGTGCTTTGTGTGTTTGACCACCACATGGCATTTGCTAAATTCAGATTAGTGGTCAACCACACTTTAATTCTAGAATATTTGCTTGTATATGCATTTTATCAAGTAAGTGTTCAATGAAAtgactgattttttatttatttttttgcctattTATTATTCAGAAATGCATCAAATTGCTATTCATGTGACAGTCTGAGTAGGTTTCTTACATACAGACTATAGATATAGAACAATTACAGACATTGTCTAAATTCAGATTTATTGTTGATAAAtaaggctgcgtctgaaattgcatacttccatactatacagtatgcttAAAAAACCAGTCCGCAAGCTGAGTAGTAtaaattcgaaaaacagtatgcgagaagtacctggatgacttactacttctagcaagattctgaagtgtgcagtCGATGCACGCTGCACTTTCCCATAATGCACTACGAGataatttatgaatgggagtgaagagACGCAACTCATGCAgttaggtcatgtgaccatgacaaaatggcggatgtagtacgtatgtgatccattcatactgctcacattcatattgtatagaacgcacttttatAACAAccaagtagtacatttaaatttaaatgcagcacctactagtaggcagtttcggaaaCAGCCTAAGAGTTTTTAATTCTTGAACTACCTTGAACACCTTTTTAGTCTGTAAAAATCCTCTTACATCAtttgatgtatttaattaaaataaatggttcAATACTGATGCATTTGAACAAAT

Function

GO:

id name namespace
GO:0009888 tissue development biological_process
GO:0071901 negative regulation of protein serine/threonine kinase activity biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072507 True 4288 lncRNA 0.36 2 39614757 39619132

Neighbor

gene id symbol gene type direction distance location
XLOC_036630 NA coding downstream 304227 39302772 ~ 39310530 (-)
XLOC_036629 NA coding downstream 322083 39275202 ~ 39292674 (-)
XLOC_036628 NA coding downstream 482119 39131799 ~ 39132638 (-)
XLOC_036627 CR392001.3 coding downstream 649497 38963323 ~ 38965260 (-)
XLOC_036626 CR392001.2 coding downstream 675797 38938290 ~ 38938960 (-)
XLOC_036632 si:dkey-63d15.12 coding upstream 31808 39650940 ~ 39654669 (-)
XLOC_036633 CT027598.2 coding upstream 89542 39708674 ~ 39749407 (-)
XLOC_036634 asgrl1 coding upstream 114146 39733278 ~ 39739640 (-)
XLOC_036635 si:ch211-170d8.8 coding upstream 123327 39742459 ~ 39760427 (-)
XLOC_036636 zgc:162025 coding upstream 197391 39816523 ~ 39822917 (-)
XLOC_036624 CR628410.1 non-coding downstream 983106 38624155 ~ 38631651 (-)
XLOC_036640 CR376731.1 non-coding upstream 245708 39864840 ~ 39864958 (-)
XLOC_036645 CR388077.1 non-coding upstream 488753 40107885 ~ 40111658 (-)
XLOC_036656 NA non-coding upstream 1778837 41397969 ~ 41425815 (-)
XLOC_036659 NA non-coding upstream 2164864 41783996 ~ 41784417 (-)
XLOC_036660 NA non-coding upstream 2165341 41784473 ~ 41784773 (-)

Expression


Co-expression Network