XLOC_036632 (si:dkey-63d15.12)


Basic Information

Item Value
gene id XLOC_036632
gene name si:dkey-63d15.12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 39650940 ~ 39654669 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071530
tttagtttacttattaatacatcattattcatgttcTCTTATTGTAAACTGTTACcattttttcaatgttttattttgaaaagatttGCTAAACCAATAATTGCTTTGACAAAAATGAGTGAAAGTTGTAGTGCGCTGAAGTGgcctgtctgtgggtgtcactaGCGTCTGACTTTATGCAGATAAGGAGCTGCTACATGTGTTTCAAACGGCAGGATACACCACACAGGAAAAATGAATAACACCTGCCTCTGCATAACGTGAGAAAACCGCTGTCTCTGCAGTTCTCATAAAATGACACGCTCAAGACTCTCTGCTCTCATCCTAACCATCTGCTTCACAGGACTCTTTTCTAGAGATGCGTTTTCATTTCATCTACCCATATCTGTGTGGCAAACGCCTAACATAACAGCAAAAGAAGGCACAAATGTCAGCATCACCTGTCACATTAATGCAGATTCTCGTGTGGATAGAATCCTGGTTAAATGGTGGCAAGACAATCAAACAGAAGTTAGGAGTGAAGGGATTACATCTCCCAATCGTCTGTCTgttaatggatttgtgtttatTAACTCAACGTTGGACCTTCTGTCAGTACATTCAAATCATAGTTTTGTGTATTACTGCTCAGCACAGCTTGATTTACCTGAACTTGGACCTGTTGAATATGGCAAAGGGACTCATGTATTTGTGgAGTCTGCACAGGTGACTGTGGAAGATTCAGGAAACCTGCACAGTAACACAGTGATGTGGTCACTGTTTTCAGGCTTGGGTTTGGTTGTTCTGATCATCTGCATTGCCTGTGGAATTCATATAAGTTTTAAAGGACACAGCAAAATGGAACCTGGAACAAAGCATGGAATAGTTGCTGCTAACAGTGAATCACCTGGCTCTGACACTACTGAAAGAGTCATTTACACAGCATTAAACATTCCTCAAGACAGTGTGAAGTCAAGAAATGAGAACTGTGCTGCTGCAGCTCTTACTTCAGAGAGCTGCACAGAGATTACGGTGACATACTCTGAGGTCCACATCAAAAAAAGACAGAAGGATGAATGATGAGCATCTTTTGAtagaattttatttatatcaCGCATTTTCATCCTGCGTGTGGGACGGTGTGTTCCTGAGATCCTGTGCAATAGTTTTGTGAATGTATTTTTGTAAATACTGTTATTATGTGTTACATAAATATTATGTGCAACCACATTTGAATCTGTTTTAACCAAT

Function

symbol description
si:dkey-63d15.12 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMIGD2 (transmembrane and immunoglobulin domain containing 2).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-080303-18 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMIGD2 (transmembrane and immunoglobulin domain containing 2).

Ensembl:

ensembl_id ENSDARG00000075480

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071530 True 1230 mRNA 0.39 6 39650940 39654669

Neighbor

gene id symbol gene type direction distance location
XLOC_036631 NA coding downstream 31808 39614757 ~ 39619132 (-)
XLOC_036630 NA coding downstream 340410 39302772 ~ 39310530 (-)
XLOC_036629 NA coding downstream 358266 39275202 ~ 39292674 (-)
XLOC_036628 NA coding downstream 518302 39131799 ~ 39132638 (-)
XLOC_036627 CR392001.3 coding downstream 685680 38963323 ~ 38965260 (-)
XLOC_036633 CT027598.2 coding upstream 54005 39708674 ~ 39749407 (-)
XLOC_036634 asgrl1 coding upstream 78609 39733278 ~ 39739640 (-)
XLOC_036635 si:ch211-170d8.8 coding upstream 87790 39742459 ~ 39760427 (-)
XLOC_036636 zgc:162025 coding upstream 161854 39816523 ~ 39822917 (-)
XLOC_036637 ftr98 coding upstream 172529 39827198 ~ 39838660 (-)
XLOC_036626 CR392001.2 non-coding downstream 711980 38938290 ~ 38938960 (-)
XLOC_036640 CR376731.1 non-coding upstream 210171 39864840 ~ 39864958 (-)
XLOC_036645 CR388077.1 non-coding upstream 453216 40107885 ~ 40111658 (-)
XLOC_036656 NA non-coding upstream 1743300 41397969 ~ 41425815 (-)
XLOC_036659 NA non-coding upstream 2129327 41783996 ~ 41784417 (-)
XLOC_036660 NA non-coding upstream 2129804 41784473 ~ 41784773 (-)

Expression


Co-expression Network