XLOC_036715 (sult1st3)


Basic Information

Item Value
gene id XLOC_036715
gene name sult1st3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 46559332 ~ 46581448 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071697
AAATGAGGTTAAAGGCACTGCAGATATCCAATTTTTAGAAGACAGTGGCACTTAAAGATCTTTTCACACAGGACACAAACTGCTCTTTCTTAAGGCCTTCAAGCTCTTCTCCCTCCTTCTCTCAGcaatTCCTGGCATGTTACTTTGCTCAAATGCAACTAACTCAAATGCAGGAGCTTGACGATTTGTTTGCCATGTGAATTGGCCCTAATTTGCACACTAAAGATAAGATAAGCTTTGATTTGTAGACATCAGCATTGCATGACAGCTCGGAATGTAATTAAACACGTAAGAGAGAAGAAAAGGTGTGCAAAAGAGAGCTGGAAGCAAAAAGGATTAAGGATTAAAACTGGTTGAAAGAAGAAATAACTTTTCCTCATAATGGAAATCTCCGACTTTTCCTCAATGAAACTGAATAGCCGGCCTGAGCTGATTGATTTTGAGGGCATTTCTATGATTCACTACTTCACTGACAACTGGGAAAAAGTAAAGAATTTTCAAGCAAGACCTGATGACATTCTAATTGCCACTTACCCAAAAGCTGGTACCACCTGGGTTTCATACATACTTGACCTTCTATACTTTGGCAATGAAAGTCCAGAACGTCAGACCTCCCAGCCTATCTATATGAGAGTGCCTTTCTTGGAGGCGTGTTTTGAAGGGATACCATTCGGAACAGAGCTGGCTGATAATCTGCCCACCTCTCCTCGCCTCATCAAAACACATTTACCTGTGCAGCTTGTGCCCAAGTCCTTCTGGGAGCAGAACTCAAAGGTTGTGTATGTAGCACGGAATGCAAAAGACAATGCAGtttcatattttcattttgatcGAATGAACATGGGACAGCCTGAACCAGGAGACTGGAACACCTTCTTACAAAAATTCATGGAAGGAAGGAATGTATTTGGTCCTTGGTATGATCATGTTAATGGATATTGGAAGAAAAAACAGACATATTCTAACATACTGTACATGTTCTATGAGGATATGGTTGAGGACACTGGACGTGAGGTGGAACGTTTGTGCTCCTTCTTGGGATTGTCCACCTCAGCCGCAGAGAGGGAGAGAATAACAAAAGGGGTTCAGTTTGATGCAATGAAACAGAACAAGATGACCAACTATTCCACTATCCCGGTCATGGACTTCAAGATCTCGCCCTTCATGCGGAAAggGAAAGTTGGAGACTGGAGAAATCACTTCACTGTGGCACAAAACGAGCAGTTTGATGAGGTCTACAAACAAAAGATGAAGAACACCACTGTCAAGTTCCGCACTGAGGTTTAGAACTGTAGTTTTTGACCTTGCAccagaataatatataaataaataattaatcatcCAGTGGTCTACTTAGAAATCATCATATTTTCCATTTTTAACtgcatattatgttttaaaacGGACATTTTAACAGTTCTTTAAAAGGATAATCTGTTTGACCAACCCTTCCTGCAACTAGTAAGAAATTTCACTGTGAACCAAAAACTTCAGACTGCATGTTCAGGTAAAAGTTTTGTATGGAGTCCAAATCAACTGttaaatctacattttaaagttttataatattatttctgttttttttttcttttttttctaataaagaaatgctttaaacattaaaa
>TCONS_00071698
CTCAAATGCAACTAACTCAAATGCAGGAGCTTGACGATTTGTTTGCCATGTGAATTGGCCCTAATTTGCACACTAAAGATAAGATAAGCTTTGATTTGTAGACATCAGCATTGCATGACAGCTCGGAATGTAATTAAACACGTAAGAGAGAAGAAAAGGTGTGCAAAAGAGAGCTGGAAGCAAAAAGGATTAAGGATTAAAACTGGTTGAAAGAAGAAATAACTTTTCCTCATAATGGAAATCTCCGACTTTTCCTCAATGAAACTGAATAGCCGGCCTGAGCTGATTGATTTTGAGGGCATTTCTATGATTCACTACTTCACTGACAACTGGGAAAAAGTAAAGAATTTTCAAGCAAGACCTGATGACATTCTAATTGCCACTTACCCAAAAGCTGGTACCACCTGGGTTTCATACATACTTGACCTTCTATACTTTGGCAATGAAAGTCCAGAACGTCAGACCTCCCAGCCTATCTATATGAGAGTGCCTTTCTTGGAGGCGTGTTTTGAAGGGATACCATTCGGAACAGAGCTGGCTGATAATCTGCCCACCTCTCCTCGCCTCATCAAAACACATTTACCTGTGCAGCTTGTGCCCAAGTCCTTCTGGGAGCAGAACTCAAAGGTTGTGTATGTAGCACGGAATGCAAAAGACAATGCAGtttcatattttcattttgatcGAATGAACATGGGACAGCCTGAACCAGGAGACTGGAACACCTTCTTACAAAAATTCATGGAAGGAAGGAATGTATTTGGTCCTTGGTATGATCATGTTAATGGATATTGGAAGAAAAAACAGACATATTCTAACATACTGTACATGTTCTATGAGGATATGGTTGAGGACACTGGACGTGAGGTGGAACGTTTGTGCTCCTTCTTGGGATTGTCCACCTCAGCCGCAGAGAGGGAGAGAATAACAAAAGGGGTTCAGTTTGATGCAATGAAACAGAACAAGATGACCAACTATTCCACTATCCCGGTCATGGACTTCAAGATCTCGCCCTTCATGCGGAAAggGAAAGTTGGAGACTGGAGAAATCACTTCACTGTGGCACAAAACGAGCAGTTTGATGAGGTCTACAAACAAAAGATGAAGAACACCACTGTCAAGTTCCGCACTGAGGTTTAGAACTGTAGTTTTTGACCTTGCAccagaataatatataaataaataattaatcatcCAGTGGTCTACTTAGAAATCATCATATTTTCCATTTTTAACtgcatattatgttttaaaacGGACATTTTAACAGTTCTTTAAAAGGATAATCTGTTTGACCAACCCTTCCTGCAACTAGTAAGAAATTTCACTGTGAACCAAAAACTTCAGACTGCATGTTCAGGTAAAAGTTTTGTATGGAGTCCAAATCAACTGttaaatctacattttaaagttttataatattatttctgttttttttttcttttttttctaataaagaaatgctttaaacatt

Function

symbol description
sult1st3 Enables sulfotransferase activity. Involved in xenobiotic metabolic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including breast cancer; gastrointestinal system cancer (multiple); lung cancer (multiple); reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to human SULT1A1 (sulfotransferase family 1A member 1).

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0008202 steroid metabolic process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0008146 sulfotransferase activity molecular_function
GO:0016740 transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030804-28 Enables sulfotransferase activity. Involved in xenobiotic metabolic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including breast cancer; gastrointestinal system cancer (multiple); lung cancer (multiple); reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to human SULT1A1 (sulfotransferase family 1A member 1).

Ensembl:

ensembl_id ENSDARG00000018361

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071697 False 1625 mRNA 0.39 9 46559332 46581448
TCONS_00071698 True 1474 mRNA 0.39 8 46559336 46572298

Neighbor

gene id symbol gene type direction distance location
XLOC_036714 sult1st2 coding downstream 34240 46513743 ~ 46525092 (-)
XLOC_036713 sult1st1 coding downstream 50138 46499098 ~ 46509194 (-)
XLOC_036712 sult1st9 coding downstream 73323 46471875 ~ 46486009 (-)
XLOC_036711 sult1st7 coding downstream 102099 46447061 ~ 46457233 (-)
XLOC_036710 qars1 coding downstream 173272 46353203 ~ 46386060 (-)
XLOC_036716 NA coding upstream 46215 46627663 ~ 46629378 (-)
XLOC_036717 gpr153 coding upstream 74722 46656170 ~ 46700278 (-)
XLOC_036718 acot7 coding upstream 176816 46758264 ~ 46894362 (-)
XLOC_036719 hes2.2 coding upstream 314997 46896445 ~ 46897734 (-)
XLOC_036720 hes2.1 coding upstream 339885 46921333 ~ 46926259 (-)
XLOC_036701 NA non-coding downstream 1087115 45468994 ~ 45472217 (-)
XLOC_036699 CU695141.1 non-coding downstream 1147587 45411581 ~ 45411745 (-)
XLOC_036696 NA non-coding downstream 1356362 45200851 ~ 45202970 (-)
XLOC_036695 NA non-coding downstream 1521556 45035269 ~ 45037776 (-)
XLOC_036690 NA non-coding downstream 1812364 44740102 ~ 44746968 (-)
XLOC_036721 NA non-coding upstream 508663 47090111 ~ 47093938 (-)
XLOC_036724 NA non-coding upstream 617186 47198634 ~ 47199165 (-)
XLOC_036726 NA non-coding upstream 675530 47256978 ~ 47258976 (-)
XLOC_036727 CR792439.2 non-coding upstream 693848 47275296 ~ 47275410 (-)

Expression


Co-expression Network