XLOC_036747 (fkbp1aa)


Basic Information

Item Value
gene id XLOC_036747
gene name fkbp1aa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 49169768 ~ 49172500 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071744
GTCCGCTAGGGGTGCTGGATGCTCGAGAGTGGCGCAGGCAGGCAGGGGTTTCTGCCCTCCTCAATCACAATTACTGATTTACTGAAGCGCATTTTCCGTGCAGAAGCTTCAGGAGTCAAAACAAGCAGCCAGGATGGGAGTCGAGGTTGAAACCATTACTCCTGGAGACGgaaGTACCTTCCCTAAAAAAGGACAGACTTGCGTCGTGCATTATGTGGGCTCTTTGACAGATGGACGCAAATTCGACTCTTCCCGGGATCGGGGAAAGCCTTTCAAGTTTAAAATCGGCAAACAGGAAGTGATCCGCGGCTGGGATGAGGGAGTAGCCCAGATGAGTGTCGGACAGCGCGCCAAGCTGACTTGCACTCCGGACTTTGCTTACGGGAGCAAGGGCCACCCGGGCGTCATTCCTCCCAACGCAACGCTCATATTCGACGTGGAGCTGATTGGCTTGGAATAAAGCCCCCACCTATGGACTCAGGTTATTCCCTATTCATTCTTTCAGGGTCGACCTTTTTAAGGAGCATTGCACCATGCATGTGATCCTCAAAAGGGGCTAGTGTTAATAGCGATACCACTTAGCTTAGCTCTGTTTTGCATTTGTATATTTTgttgccttttttttcttttctgcttgACATAATCACTGGTTATACTCTCAATCATTGGATTTCTCTAGAAGACGCACGTTTCTTTTTGTTTTCCTTCTctctttttatatttgatttctgTGTTGTAAACGCGATCACAGCGACAGGGTTTTGGCTGAGCTGGTAATAAGTACTCTGGTGGGGAAATCTGGTTAAGTATACAACTACttgaaaataaattgtttataaaaagttGA
>TCONS_00071745
TGGATGCTCGAGAGTGGCGCAGGCAGGCAGGGGTTTCTGCCCTCCTCAATCACAATTACTGATTTACTGAAGCGCATTTTCCGTGCAGAAGCTTCAGGAGTCAAAACAAGCAGCCAGGATGGGAGTCGAGGTTGAAACCATTACTCCTGGAGACGgaaGTACCTTCCCTAAAAAAGGACAGACTTGCGTCGTGCATTATGTGGGCTCTTTGACAGATGGACGCAAATTCGACTCTTCCCGGGATCGGGGAAAGCCTTTCAAGTTTAAAATCGGCAAACAGGAAGTGATCCGCGGCTGGGATGAGGGAGTAGCCCAGATGAGTGTCGGACAGCGCGCCAAGCTGACTTGCACTCCGGACTTTGCTTACGGGAGCAAGGGCCACCCGGGCGTCATTCCTCCCAACGCAACGCTCATATTCGACGTGGAGCTGATTGGCTTGGAATAAAGCCCCCACCTATGGACTCAGGTCGACCTTTTTAAGGAGCATTGCACCATGCATGTGATCCTCAAAAGGGGCTAGTGTTAATAGCGATACCACTTAGCTTAGCTCTGTTTTGCATTTGTATATTTTgttgccttttttttcttttctgcttgACATAATCACTGGTTATACTCTCAATCATTGGATTTCTCTAGAAGACGCACGTTTCTTTTTGTTTTCCTTCTctctttttatatttgatttctgTGTTGTAAACGCGATCACAGCGACAGGGTTTTGGCTGAGCTGGTAATAAGTACTCTGGTGGGGAAATCTGGTTAAGTATACAACTACttgaaaataaattgtttataaaaagtt
>TCONS_00071746
TGAAGCGCATTTTCCGTGCAGAAGCTTCAGGAGTCAAAACAAGCAGCCAGGATGGGAGTCGAGGTTGAAACCATTACTCCTGGAGACGgaaGTACCTTCCCTAAAAAAGGACAGACTTGCGTCGTGCATTATGTGGGCTCTTTGACAGATGGACGCAAATTCGACTCTTCCCGGGATCGGGGAAAGCCTTTCAAGTTTAAAATCGGCAAACAGGAAGTGATCCGCGGCTGGGATGAGGGAGTAGCCCAGATGAGTGTCGGACAGCGCGCCAAGCTGACTTGCACTCCGGACTTTGCTTACGGGAGCAAGGGCCACCCGGGCGTCATTCCTCCCAACGCAACGCTCATATTCGACGTGGAGCTGATTGGCTTGGAATAAAGCCCCCACCTATGGACTCAGGTTATTCCCTATTCATTCTTTCAGGGTACGTGCGACATCTTCTGCTTTGACTTGTTCTGGATGTGCGCTGGATGGCTTTAATAACCAGCCGATAATCTTTAAAGCAGATTACTCTAGTCTCGCTCTTAAACGTGTCGTCGAGTTTATTTAACAGGCTCTTGAGATTAAAACCCTCATAATCGTATTTGTGGCTTTTGAGGAACACGGTTCGCTTGTTTAACAAACCCTCTCTCTTTGTTTTCTTCCAGGTCGACCTTTTTAAGGAGCATTGCACCATGCATGTGATCCTCAAAAGGGGCTAGTGTTAATAGCGATACCACTTAGCTTAGCTC

Function

symbol description
fkbp1aa Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in Graves' disease. Orthologous to human FKBP1A (FKBP prolyl isomerase 1A) and FKBP1B (FKBP prolyl isomerase 1B).

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0061077 chaperone-mediated protein folding biological_process
GO:0005737 cytoplasm cellular_component
GO:0016853 isomerase activity molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-7275 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in Graves' disease. Orthologous to human FKBP1A (FKBP prolyl isomerase 1A) and FKBP1B (FKBP prolyl isomerase 1B).

Ensembl:

ensembl_id ENSDARG00000022684

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071744 False 847 nonsense_mediated_decay 0.47 5 49169768 49172500
TCONS_00071745 False 805 mRNA 0.46 5 49169770 49172485
TCONS_00071746 True 731 mRNA 0.48 4 49170025 49172418

Neighbor

gene id symbol gene type direction distance location
XLOC_036746 CT737131.1 coding downstream 17293 49149904 ~ 49152475 (-)
XLOC_036745 NA coding downstream 104729 49043744 ~ 49065039 (-)
XLOC_036744 wrap73 coding downstream 321996 48816082 ~ 48847772 (-)
XLOC_036743 NA coding downstream 371736 48795458 ~ 48798032 (-)
XLOC_036742 BX323556.1 coding downstream 379181 48778961 ~ 48790587 (-)
XLOC_036748 zgc:171501 coding upstream 631 49173131 ~ 49201258 (-)
XLOC_036749 fam110a coding upstream 33557 49206057 ~ 49207319 (-)
XLOC_036750 prickle3 coding upstream 58448 49230948 ~ 49304602 (-)
XLOC_036751 plp2 coding upstream 138285 49310785 ~ 49345388 (-)
XLOC_036752 si:ch211-194e1.7 coding upstream 186244 49358744 ~ 49375608 (-)
XLOC_036735 NA non-coding downstream 621676 48546053 ~ 48548092 (-)
XLOC_036761 NA non-coding upstream 631488 49803988 ~ 49825917 (-)
XLOC_036762 NA non-coding upstream 691578 49864078 ~ 49871582 (-)
XLOC_036766 NA non-coding upstream 964975 50137475 ~ 50139983 (-)
XLOC_036772 NA non-coding upstream 1336261 50508761 ~ 50511887 (-)
XLOC_036773 CABZ01060030.1 non-coding upstream 1345282 50517782 ~ 50517903 (-)

Expression


Co-expression Network