XLOC_036751 (plp2)


Basic Information

Item Value
gene id XLOC_036751
gene name plp2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 49310785 ~ 49345388 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071752
cacactcacactttccCCTCGCAGTGTTCACTAGTGCTCTGCGCGCTCCAGCGACACACGTCCAGGAAATTCATGAAGCAACCGAACTCGGCGTAGGAGTTAACGGATTTAGTACATAACTACGCTTTCATTGTCTTTCACCAGAAGAAGTCTTTTAATTTGTGAACGTTTGCTGACAAGGACACCCAGAAAGCGCTATTTATTAGGAAACATCTGCAGAATGGCAGAAACTGAAGGAAGTCCGTTTGGAGGCTGTTTGGAGAAACTGATGAGCTATGCGCGGACTCGAAAGGGGACGATACTGGCCGCCGAAATACTCCTCAGTTTCATCATCCTGATCTGTTATGCCGCATCGATGTACGGAGGGTATACAGCGGTCGCCATCTGCGAGATGGTCTTTGCCATCATCTTCTTCGTTGTCTATATGCTGGAGCTGGACAAACAGTTCCTGGTGGTGAACTGGCTCTGGAGCGATCTGTTCCGTGCTGTAATTGGTGCAGCACTTTATATAATCACCTCTCTCATCTGTGTGATCGGTGGAACTGGCGATGGGGCTCGCATCGCTGGTGGGGTGTTTGGTCTGCTGGCTGGGATCTTGTTTGCGTATGATTCCTACACGCTCTACTTGGACATCAAGAGCAGCAGACAGCACGCAGCTGCACCCACAGatgaCAGAGTTTGAAAACTGCTTGCCTCACTACAACATTAACAGCAACCAAAACATGGAGATCGAGTCTAAAAATGGCAAAAGGAGAGAATTCCTGAGAGTTATCGCAAAGTTACCAAGACAGATGAAGACTGGAGGAATGCAAAAGggatcccacacacacacacacacactcacagatgcATGCATACAAAAGAAGCAAAAGGGGCTGAACTGTGAGACTGATGAGAAGAAGAAACAGCCATATACGAAGGAACAGAGAGCTGTTGGCATCCAAAGAGTCATTGCTGTCGTCTTGCTCTAGCACAAAATCTTCAGCTTGTTTGGTTACAAAAGGGCTTAAATGGATAGTTCGCCCAAAATTGACAACTCTGTCATCATTCACACACCCTTTATGACTGTCTTACTTTTGTTGAATGCAaatgaaggtattttgaagaatgctgaaaaacctgtaaccattgacttccaaagtatttgaTTTAcctagaagtcaatggtttcagatTTCCAGAAAAAAAATGGCGTCTGTGGATGTTCTGTCATCATTCTTTATGACCTTCTCTCTTTTCTTGAAtgcaaaagaggatattttgaagaatgttggaatcttcataaaaataaaatagaaa

Function

symbol description
plp2 Enables chemokine binding activity. Predicted to be involved in ion transport. Located in plasma membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030710-11 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in adaxial cell; cardiovascular system; epiphysis; and musculature system. Orthologous to human PLP2 (proteolipid protein 2).

Ensembl:

ensembl_id ENSDARG00000036630

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071752 True 1299 mRNA 0.44 5 49310785 49345388

Neighbor

gene id symbol gene type direction distance location
XLOC_036750 prickle3 coding downstream 6183 49230948 ~ 49304602 (-)
XLOC_036749 fam110a coding downstream 103466 49206057 ~ 49207319 (-)
XLOC_036748 zgc:171501 coding downstream 109527 49173131 ~ 49201258 (-)
XLOC_036747 fkbp1aa coding downstream 138285 49169768 ~ 49172500 (-)
XLOC_036746 CT737131.1 coding downstream 158310 49149904 ~ 49152475 (-)
XLOC_036752 si:ch211-194e1.7 coding upstream 13356 49358744 ~ 49375608 (-)
XLOC_036753 si:ch211-194e1.7 coding upstream 38875 49384263 ~ 49399470 (-)
XLOC_036754 sypb coding upstream 58280 49403668 ~ 49432061 (-)
XLOC_036755 opn7d coding upstream 132638 49478026 ~ 49499457 (-)
XLOC_036756 frmd3 coding upstream 272558 49617946 ~ 49623328 (-)
XLOC_036745 NA non-coding downstream 245746 49043744 ~ 49065039 (-)
XLOC_036743 NA non-coding downstream 512753 48795458 ~ 48798032 (-)
XLOC_036742 BX323556.1 non-coding downstream 520198 48778961 ~ 48790587 (-)
XLOC_036735 NA non-coding downstream 762693 48546053 ~ 48548092 (-)
XLOC_036761 NA non-coding upstream 458600 49803988 ~ 49825917 (-)
XLOC_036762 NA non-coding upstream 518690 49864078 ~ 49871582 (-)
XLOC_036766 NA non-coding upstream 792087 50137475 ~ 50139983 (-)
XLOC_036772 NA non-coding upstream 1163373 50508761 ~ 50511887 (-)
XLOC_036773 CABZ01060030.1 non-coding upstream 1172394 50517782 ~ 50517903 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000050_05327777_05328382 PLP2 coding CI01000050 null 5327777 ~ 5328399 (+)