XLOC_036752 (si:ch211-194e1.7)


Basic Information

Item Value
gene id XLOC_036752
gene name si:ch211-194e1.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 49358744 ~ 49375608 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071753
GGAGTAAGGGGAAGCTGCAGCTCCGGGCCTGCAGCTCCATACTATTGGATTACAAGAGCAGTTTCATTTTTAAGACGATTTAAAAACATCAACTCTGCTGTGTGCGTCTATTGGACTAAATCAGTCTCCAGTGGACTGGTGAAGGCACAGGCTCTAAAATGAGTTTCAATGAGAAGAAAGACGATGGGGGTTCTGTGCATCTTCAGCCACAGAAAGCAGCATTtacagagcccagctgtgtgtctatgaagagtagCAGCTCTATGTTTGAGCCTCTCAAATTCAGAGATAAAACAGTCACATCTCATGTCCAATTGCAGCACCAGGAAGCAGCATGCCCAGAGCCCAGCTGTATGTCTATGAAGAGCGACAGCTCTATGTTTGAACCTCTTAAATTTACAAATGAATCAGTGACCCCTGATGTAAGGGTGTTTCCTCACAAAGCAGCTTGTCCAGAACCCAGCTGTGTTTCTTTGAAGAGCAACAGCTCCATGTTTGAACCTCTTAAGTTCGAAGATGAAAAACTAAGCTTTGACTTCATGCTTGAGAAGACTGAAGCCTCGGAGAAACCAATGCATGATGAATTGCAGAGAGTCAAGGGCCAACACAAAAGCAGcatgaagaaaaaatatgaaacattattTGATGGAATGAGTCTACAAGACAACGAAACCCTTCTTAACAGTATCTATACACAGCTCTACATAATAGAGGGAGAAAGTGAGGGGGTGAATGAAGAACACGAAGTTCTAAATATGGAGAAATCAGCCAAAATGAAACACTCACAAGACACTCCAATCTTCTGCAATGATATTTTTACAGCATTAGCTGAAGCTGGATGTGAGGAGAAAGACAATATCAAGGTTGTTCTTACTAAAGGCATTGCTGGTATCGGTAAAACCATATCTGTACAGAAGTTCATTTTGGACTGGGCTGAGGGAAACTCCAATCAGCaagtagatttcatgtttgtgtttccatttcgagagctgaacttgattcAAGATCAACAatacagtcttcacagacttctgctggacttttaTCCTGAGATCCAAGATCTGAACACAAAGATTTTTAAGGAATGTACGGTTATGTTCATTTTTGATGGTTTAGATGAAAGCAGAATACCACTGATGTTTTCAGATGGTCAGAAAGTTTGTGATGTGGCTGAAAAATCTTCTGTCGGTGCGTTGATGTCAAACCTGATGAAAGGAGagctgcttccttctgctctcatctggatcaccactagaccagcagcagccaatcagatcccCTCAAAATACATCAACCGACTAACAGAAATTCAGGGATTCgatgagcctcagaaggaggaatatttcaggaagagagttAGTGATGAGCATCAAGCCAacagaatcatctcccacatcagaagagcaagaagcctcaacatcatgtgccacatacccgtcttctgctggatctcagccACTGTGCTTCAAAACCTCCTGAAACAAGATGACaatgcagaaatccctcaaactctgactgagatgtacattcacttcctgctgattcagataaACACGAGGAATCAGAAATATGAGGAacgagatccagagaaactcctgcagtccgGCAGAGAAGTGATTGtgaaacttgctgaagtggctttcaaaCAGCTTATGAAGGGAAACGTGATGTTCTACGAAGAGGACCTGAGAGAGAGCAGCATAGATATCACTGACGCCTCAGTATActctgggatctgcactgagatctttaaggaggaatcTGTAATTCATCAGAGGAAGATCTATAGCTTCATTCATCTGAGCACTCAGGAGTTTCTTGCTGCTTTCTATTGGTTTCATTGCTACATAAACAGACTCATGGAACCACTTAAGTTCTTTGATTCTCTATACTACTTGCTCAGAGGGATAGTAGACAAAGCGATAGAGAGTAAAAATGGACACCTtgatctgttcctgcggttcctgctaGGTGTCTCAATGGagaccaatcagagactcttgcAGGGTCTATTGACACACAATGAGAACAGCTCAGAGAGCATCGAGAGAAccacacagtacattaaagagaAGATCAAAGGTGGAGGTGGACTCTCcactgaaagatccatcaatctgttcctctgtctgctggaagtGAAGGATCAGACGTTGTCCAGAGAGATTCAGGATTTTGTCAAATCAGAGAAGCATTCAGAGAagaaactctctcctgctcactgctcagcGGTTGCCTACATGCTTCAGATGTCACTGGAGGTGCTGGATGAGCTGGATGTTCAGACATACAACACATCAGATGAGGGTAGAAGACGACTGATACCTGCTGTGATCAACTGCAGAAAAGCGTTTTTTGCTGGGTGTAATCTCACTGTCCAGTCCTGTGAAATTGTTGcatcagctctacaatcctcaaactgtgtcttGAGAGAGCTGGACCTCAGTAACAATGACCTTGAGGATTCTGGGGCGAAACTGCTTTCTGATGGtctgaagagtccaaactgtcACCTGGAGATGTTGAGgttgtctggctgtatggtgacagagaaaggctgtggttttctgtcttcagctctgagttCAAACCCTTCACACTTGAGAGAGCTGGATTTGAGCTACAATCACCCAGGACCATCAGGAGTTCGGCTGCTCACAGACAAACTGCATGATCCAAAATGCTCACTCAAGATACTCAAtgTGAGTCATGATGGTCATTTCAGAATTACACAAGGACTTCAAAAATATGCATGTTCTCTCACACTAGACCCAAACACAGCATACTGTCATCTCATTTTGACTGAGGAGAACAAAAAGGTTACCTATGTGGAAGAGCAGCAGTCATATCCCGATCTTCCAGAGCGATTTGAGCACCAGGAGCAGGTTCTGTGTCAAGAGGCTCTtactggacgctgttactgggaagTTGAAGGGACTGGGAGAGTTGATACATCTGTGACGTATAAAGGAATCGGCAGAAAAGGAGGAAGTGATTGTAGGTTTGGATACAATGACAAATCCTGGAGTCTGTACTGCTCTAAATATAGATACACTATTTGGCACAATAATAACATCACTGACATCCCTGTACCTTCACCCCCCTCTAATAGAGTAGGGGTGTATGTTGACTGTCCAGCCGGTACGCTTTCATTTTACAGCGTTTccgacagacacacactcacacacttacacacatttaACACCACATTCAGTGAGTCGCTCTATGCTGGGATTAGGGTATATCCTGATTCTTCAGTGTCTCTGTGTTAAATATGAGAGTAATAACAAGAAAGCAAACACTTAGTTTAAAATTCGACAG
>TCONS_00071754
CAAGTATCCACTTTCTCTTTCGATTCCAAGGAGTAAGGGGAAGCTGCAGCTCCGGGCCTGCAGCTCCATACTATTGGATTACAAGAGCAGTTTCATTTTTAAGACGATTTAAAAACATCAACTCTGCTGTGTGCGTCTATTGGACTAAATCAGTCTCCAGTGGACTGGTGAAGGCACAGGCTCTAAAATGAGTTTCAATGAGAAGAAAGACGATGGGGGTTCTGTGCATCTTCAGCCACAGAAAGCAGCATTtacagagcccagctgtgtgtctatgaagagtagCAGCTCTATGTTTGAGCCTCTCAAATTCAGAGATAAAACAGTCACATCTCATGTCCAATTGCAGCACCAGGAAGCAGCATGCCCAGAGCCCAGCTGTATGTCTATGAAGAGCGACAGCTCTATGTTTGAACCTCTTAAATTTACAAATGAATCAGTGACCCCTGATGTAAGGGTGTTTCCTCACAAAGCAGCTTGTCCAGAACCCAGCTGTGTTTCTTTGAAGAGCAACAGCTCCATGTTTGAACCTCTTAAGTTCGAAGATGAAAAACTAAGCTTTGACTTCATGCTTGAGAAGACTGAAGCCTCGGAGAAACCAATGCATGATGAATTGCAGAGAGTCAAGGGCCAACACAAAAGCAGcatgaagaaaaaatatgaaacattattTGATGGAATGAGTCTACAAGACAACGAAACCCTTCTTAACAGTATCTATACACAGCTCTACATAATAGAGGGAGAAAGTGAGGGGGTGAATGAAGAACACGAAGTTCTAAATATGGAGAAATCAGCCAAAATGAAACACTCACAAGACACTCCAATCTTCTGCAATGATATTTTTACAGCATTAGCTGAAGCTGGATGTGAGGAGAAAGACAATATCAAGGTTGTTCTTACTAAAGGCATTGCTGGTATCGGTAAAACCATATCTGTACAGAAGTTCATTTTGGACTGGGCTGAGGGAAACTCCAATCAGCaagtagatttcatgtttgtgtttccatttcgagagctgaacttgattcAAGATCAACAatacagtcttcacagacttctgctggacttttaTCCTGAGATCCAAGATCTGAACACAAAGATTTTTAAGGAATGTACGGTTATGTTCATTTTTGATGGTTTAGATGAAAGCAGAATACCACTGATGTTTTCAGATGGTCAGAAAGTTTGTGATGTGGCTGAAAAATCTTCTGTCGGTGCGTTGATGTCAAACCTGATGAAAGGAGagctgcttccttctgctctcatctggatcaccactagaccagcagcagccaatcagatcccCTCAAAATACATCAACCGACTAACAGAAATTCAGGGATTCgatgagcctcagaaggaggaatatttcaggaagagagttAGTGATGAGCATCAAGCCAacagaatcatctcccacatcagaagagcaagaagcctcaacatcatgtgccacatacccgtcttctgctggatctcagccACTGTGCTTCAAAACCTCCTGAAACAAGATGACaatgcagaaatccctcaaactctgactgagatgtacattcacttcctgctgattcagataaACACGAGGAATCAGAAATATGAGGAacgagatccagagaaactcctgcagtccgGCAGAGAAGTGATTGtgaaacttgctgaagtggctttcaaaCAGCTTATGAAGGGAAACGTGATGTTCTACGAAGAGGACCTGAGAGAGAGCAGCATAGATATCACTGACGCCTCAGTATActctgggatctgcactgagatctttaaggaggaatcTGTAATTCATCAGAGGAAGATCTATAGCTTCATTCATCTGAGCACTCAGGAGTTTCTTGCTGCTTTCTATTGGTTTCATTGCTACATAAACAGACTCATGGAACCACTTAAGTTCTTTGATTCTCTATACTACTTGCTCAGAGGGATAGTAGACAAAGCGATAGAGAGTAAAAATGGACACCTtgatctgttcctgcggttcctgctaGGTGTCTCAATGGagaccaatcagagactcttgcAGGGTCTATTGACACACAATGAGAACAGCTCAGAGAGCATCGAGAGAAccacacagtacattaaagagaAGATCAAAGGTGGAGGTGGACTCTCcactgaaagatccatcaatctgttcctctgtctgctggaagtGAAGGATCAGACGTTGTCCAGAGAGATTCAGGATTTTGTCAAATCAGAGAAGCATTCAGAGAagaaactctctcctgctcactgctcagcGGTTGCCTACATGCTTCAGATGTCACTGGAGGTGCTGGATGAGCTGGATGTTCAGACATACAACACATCAGATGAGGGTAGAAGACGACTGATACCTGCTGTGATCAACTGCAGAAAAGCGTTGTAAATGTTTGCTCCATGTTACAGTAATAAAATCAGTttcttaaaaacaattacaacttCTATTGTTTACCACAAAGTTTTGAgatcattttgttttagtttgtagaATGTCTTCTATTAAAATAATGTCTAGAATGAATTTATTTCAATGCTAATATTTGCACTGAAGTTAAGAATTAAATGTGTTTCACTGTTGCAGTTTTGCTGGGTGTAATCTCACTGTCCAGTCCTGTGAAATTGTTGcatcagctctacaatcctcaaactgtgtcttGAGAGAGCTGGACCTCAGTAACAATGACCTTGAGGATTCTGGGGCGAAACTGCTTTCTGATGGtctgaagagtccaaactgtcACCTGGAGATGTTGAGGTAATTCATTGtctagagctgcgtcccaaatcacaaacttatgcactattctacgccattttgtagtataaatagtgtaagtagtgtgttcacactgtaaactctcaaaataataagtgcactttaattacccggatgatgcactcattcagccgctaaaatgaagtgtgtaatgatggacacttcacacactcaacgaccgcaggtttgcttatgtagcggaaggggcggagctatcggacgcacatgttgaataactttatttattttggatggtgaaagcaaaattctcctacgagagtgattataacgcctcccgatggtgaatgcggttatacccacggcaggtattatttgataattcagtcatttatttcactgatttggcaaccgtcaaacgtcatcagggaaactgtttgaatttccgcttagtaaaaaaaacaagtgtgccatttgggacgacactagtaagtaagtaagtaaagtttatttataaagcacatttacttcagtttggcactgaccaaagtgctgaacaaaaccatagcacacactctaaaagagtaaaagataacaataaaagtaataataggaataaaagtattacagcaacaaccacaataaagattaaaagcctgggaatgcaatagaataaaaatgtgtcttaagtctggacttaaaaatagagagagaagaaGCACTTGTAATATCCGGTGGCAGCTGGTTCCACAAACGAGGAGCAGCGACTGCAAAGGCTCTATCCCCTTTCAGTTTAAGTTGTGACAGAGGAACttgaagtaaaattttatttgaggaCCTAAGAGACCGAGGAGTTGACTGTAAGTTAATAAGCTCTGATATATAAGAAGGTGCTTGCccattcagtgctttaaaaacaataagtaaaatttTGAACTGAATTCTAAAATTAACAGGAAGCCAATGAAGGGATGCTAAAACTGATGAGATATGAGCATGTTTTTTGGTGCCTGTTAAAAGTCTAGCTGCCGCATTTTGAACCAACTGCAACCGGGCCAATGAGGATTGGGGGAAACCAACATATAAAGAATTGCAATAGTCTAGGCGGGACGTGATAAAAGCATGTATGACCT

Function

symbol description
si:ch211-194e1.7 Predicted to be involved in intracellular signal transduction.

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081105-104 Predicted to be involved in intracellular signal transduction.

Ensembl:

ensembl_id ENSDARG00000068127

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071753 False 3321 mRNA 0.43 9 49358744 49375579
TCONS_00071754 True 3867 mRNA 0.41 5 49363724 49375608

Neighbor

gene id symbol gene type direction distance location
XLOC_036751 plp2 coding downstream 13356 49310785 ~ 49345388 (-)
XLOC_036750 prickle3 coding downstream 54142 49230948 ~ 49304602 (-)
XLOC_036749 fam110a coding downstream 151425 49206057 ~ 49207319 (-)
XLOC_036748 zgc:171501 coding downstream 157486 49173131 ~ 49201258 (-)
XLOC_036747 fkbp1aa coding downstream 186244 49169768 ~ 49172500 (-)
XLOC_036753 si:ch211-194e1.7 coding upstream 8655 49384263 ~ 49399470 (-)
XLOC_036754 sypb coding upstream 28060 49403668 ~ 49432061 (-)
XLOC_036755 opn7d coding upstream 102418 49478026 ~ 49499457 (-)
XLOC_036756 frmd3 coding upstream 242338 49617946 ~ 49623328 (-)
XLOC_036757 frmd3 coding upstream 262987 49638595 ~ 49705058 (-)
XLOC_036746 CT737131.1 non-coding downstream 206269 49149904 ~ 49152475 (-)
XLOC_036745 NA non-coding downstream 293705 49043744 ~ 49065039 (-)
XLOC_036743 NA non-coding downstream 560712 48795458 ~ 48798032 (-)
XLOC_036742 BX323556.1 non-coding downstream 568157 48778961 ~ 48790587 (-)
XLOC_036735 NA non-coding downstream 810652 48546053 ~ 48548092 (-)
XLOC_036761 NA non-coding upstream 428380 49803988 ~ 49825917 (-)
XLOC_036762 NA non-coding upstream 488470 49864078 ~ 49871582 (-)
XLOC_036766 NA non-coding upstream 761867 50137475 ~ 50139983 (-)
XLOC_036772 NA non-coding upstream 1133153 50508761 ~ 50511887 (-)
XLOC_036773 CABZ01060030.1 non-coding upstream 1142174 50517782 ~ 50517903 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G119259 NA non-coding NC_053122.1 CM020919.1 31454479 ~ 31454958 (-)