G1759007


Basic Information

Item Value
gene id G1759007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 60400018 ~ 60429043 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2014250
agaactccagaacacattcaacagtagtctatcagaacagaactccagaacacattcaacagtagtctatcagaacagaactccagaacacattgaacagtagtctatcagaacagaactccagaacacatccaacagtagtctatcagaacagacctccagaacacattcaacagtagtctatcagactagaacagaactccagaacacattcaacagtagtctatcagaacagaactccagaacacattcaacagtagtctatcagaacagaactccagaacacattcaacagtagtctatcagaacagaactccagaacacattcaacagtagtctatcagaacagaactccagaacacattcaacagcagtctatcagaacagaactccagaacacattcaacagtagtctatcagaacagaactccagaacacattcaacagtagtctatcagaacagaactccagaacacattgaAAAGTATTCTATCAGAACAGatctccagaacacatccaacagtattctatcagaacagaactccagaacacattcaacagtagtctatcagaacagaactccagaacacattcaacagtagtctatcagaacagaacagaactccagaacacattcaacagtagtctatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2014250 True 651 lncRNA 0.40 2 60400018 60429043

Neighbor

gene id symbol gene type direction distance location
LOC118943030 NA coding upstream 80308 60319603 ~ 60319710 (+)
LOC118942814 LOC106578145 coding upstream 92113 60284625 ~ 60307905 (+)
LOC110500950 LOC106608479 coding upstream 127210 60257181 ~ 60272808 (+)
si:dkey-9k7.3 LOC106608480 coding upstream 166870 60189515 ~ 60233148 (+)
LOC110500788 LOC106608498 coding upstream 270383 60125015 ~ 60129635 (+)
LOC110500797 4f2 coding downstream 184347 60613390 ~ 60629257 (+)
LOC110500798 LOC106608478 coding downstream 203369 60632412 ~ 60654106 (+)
LOC118942965 NA coding downstream 319963 60749006 ~ 60774137 (+)
LOC118942966 NA coding downstream 349516 60778559 ~ 60779842 (+)
LOC118942963 NA coding downstream 373350 60802393 ~ 60803538 (+)
G1758786 NA non-coding upstream 41273 60358349 ~ 60359351 (+)
G1758818 NA non-coding upstream 46926 60351646 ~ 60353092 (+)
G1758788 NA non-coding upstream 54941 60344422 ~ 60345077 (+)
G1758802 NA non-coding upstream 70764 60317478 ~ 60329254 (+)
G1758782 NA non-coding upstream 85347 60313673 ~ 60314671 (+)
G1759051 NA non-coding downstream 41603 60470646 ~ 60472386 (+)
G1759050 NA non-coding downstream 44789 60473832 ~ 60482499 (+)
G1759049 NA non-coding downstream 47159 60476202 ~ 60483619 (+)
G1759064 NA non-coding downstream 75588 60504631 ~ 60505028 (+)
G1759069 NA non-coding downstream 93818 60522861 ~ 60523086 (+)
G1758801 NA other upstream 73398 60322215 ~ 60326620 (+)
G1757578 NA other upstream 1713495 58683137 ~ 58686523 (+)
rwdd rwdd4 other upstream 1989939 58405236 ~ 58411726 (+)
G1759168 LOC101154678 other downstream 293115 60722158 ~ 60722472 (+)
G1759267 NA other downstream 381159 60810202 ~ 60810620 (+)
G1760504 NA other downstream 2306008 62689513 ~ 62741819 (+)
G1760587 NA other downstream 2382732 62811775 ~ 62814241 (+)
LOC110500953 LOC106594432 other downstream 2444638 62873681 ~ 62903536 (+)

Expression


Co-expression Network