G1758788


Basic Information

Item Value
gene id G1758788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 60344422 ~ 60345077 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2013949
gagacaatgaggagggagagcatcaaggagaggggaggagacaatgagaagagagattgagagcatcagggagaggagaggagagaatgagaagagTGAAGGAGAGCatcagggaggaggggggagagaatgagaagggAGAGCatcagggagaggggaggggggaggagacaatgaggagggagagcatcagggagaggggaggagacaatgagaagagagaaggagagcatcagggaggagggagaagacaatgagaagagagaaggagagcatcAGCTATACATTTTTCAGCCAATAAATAAAGGCCCAATAGTTTGCCTGAGATAAATTGTTGAGCACACTATCAAAGAAGAAACTAAACAAACACATTTGGTTCCTTAAAAGTTGTGGGAATGTATGTTTTCGGTTTGACGTTGGTTGCGGGAACGAAGGCCTACGTTTCCTTACCTGTAAAATGGGATTATTCTTTTTTTGTTTTAAGAGTAGAAGTGAACATTTCTtctgttctgggaacctttatgttttaggttgcagggaggatctgagaacgttttactctgaTTCCTTGAAAGTGTCACTGGGAGGTTATTTTAGAGCTCTTAGAATGgaaattgtagtttttttttttcgaaatgtgttttaataaagtTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2013949 True 656 lncRNA 0.43 1 60344422 60345077

Neighbor

gene id symbol gene type direction distance location
LOC118943030 NA coding upstream 24712 60319603 ~ 60319710 (+)
LOC118942814 LOC106578145 coding upstream 36517 60284625 ~ 60307905 (+)
LOC110500950 LOC106608479 coding upstream 71614 60257181 ~ 60272808 (+)
si:dkey-9k7.3 LOC106608480 coding upstream 111274 60189515 ~ 60233148 (+)
LOC110500788 LOC106608498 coding upstream 214787 60125015 ~ 60129635 (+)
LOC110500797 4f2 coding downstream 268313 60613390 ~ 60629257 (+)
LOC110500798 LOC106608478 coding downstream 287335 60632412 ~ 60654106 (+)
LOC118942965 NA coding downstream 403929 60749006 ~ 60774137 (+)
LOC118942966 NA coding downstream 433482 60778559 ~ 60779842 (+)
LOC118942963 NA coding downstream 457316 60802393 ~ 60803538 (+)
G1758802 NA non-coding upstream 15168 60317478 ~ 60329254 (+)
G1758782 NA non-coding upstream 29751 60313673 ~ 60314671 (+)
G1758784 NA non-coding upstream 30895 60312231 ~ 60313527 (+)
G1758746 NA non-coding upstream 127445 60216582 ~ 60216977 (+)
G1758666 NA non-coding upstream 156805 60130890 ~ 60187617 (+)
G1758818 NA non-coding downstream 6569 60351646 ~ 60353092 (+)
G1758786 NA non-coding downstream 13272 60358349 ~ 60359351 (+)
G1759007 NA non-coding downstream 54941 60400018 ~ 60429043 (+)
G1759051 NA non-coding downstream 125569 60470646 ~ 60472386 (+)
G1759050 NA non-coding downstream 128755 60473832 ~ 60482499 (+)
G1758801 NA other upstream 17802 60322215 ~ 60326620 (+)
G1757578 NA other upstream 1657899 58683137 ~ 58686523 (+)
rwdd rwdd4 other upstream 1934343 58405236 ~ 58411726 (+)
G1756789 NA other upstream 2416178 57926480 ~ 57928244 (+)
G1755570 NA other upstream 3549848 56793731 ~ 56794574 (+)
G1759168 LOC101154678 other downstream 377081 60722158 ~ 60722472 (+)
G1759267 NA other downstream 465125 60810202 ~ 60810620 (+)
G1760504 NA other downstream 2389974 62689513 ~ 62741819 (+)

Expression


Co-expression Network