G1759836


Basic Information

Item Value
gene id G1759836
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 61827556 ~ 61827984 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2015319
AGTCACAAACACTATTTACAAGTAGAAGGACCCTTTTCTCCCTGACCGGCGAGTTTATTCAACATGTTGGCGAGACCAAAGTAGAGACGAAAAGGCTTCCGTTTGAGACGGACTGCTAGTTATCCACACGGCTTTTCCTTCATCGTCCTCAATTCAGTCTCTCGACCGTGATACAATTATAGGTAAACaaactaaacaaacaaaaacaacaacacaacagtcCTCACTCTATTAGGTCAAGGTCAAGGGGTTAGAGTTCGGGGGGGGTCAGGAACAGAATGGTGGACTAATGTAAGGACCTACATCAATATTTCCCCACAAAACACTTCTGGAGGggaagagcgaaagagagagagatagaaatagaCATATGTAAAGTTGAAGCGATGAAACAACAACATTCCTCTCTTCTCATCAGTCCAAGTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2015319 True 429 lncRNA 0.43 1 61827556 61827984

Neighbor

gene id symbol gene type direction distance location
LOC110531293 LOC108431879 coding upstream 23065 61725825 ~ 61804491 (+)
LOC110500905 LOC106608450 coding upstream 903465 60900777 ~ 60924091 (+)
LOC118942964 NA coding upstream 1017872 60808485 ~ 60809684 (+)
LOC118942963 NA coding upstream 1024018 60802393 ~ 60803538 (+)
LOC118942966 NA coding upstream 1047714 60778559 ~ 60779842 (+)
LOC118942795 NA coding downstream 158482 61984438 ~ 61987741 (+)
LOC110512266 NA coding downstream 164787 61992771 ~ 61994235 (+)
LOC118942970 NA coding downstream 200221 62027815 ~ 62032638 (+)
LOC118942796 LOC106578155 coding downstream 240410 62068394 ~ 62076250 (+)
fga LOC106608433 coding downstream 390632 62218616 ~ 62246175 (+)
G1759832 NA non-coding upstream 5858 61820385 ~ 61821698 (+)
G1759831 NA non-coding upstream 13553 61813745 ~ 61814003 (+)
G1759810 NA non-coding upstream 80341 61746785 ~ 61747215 (+)
G1759796 NA non-coding upstream 115789 61710515 ~ 61711767 (+)
G1759837 LOC106592087 non-coding downstream 2031 61830015 ~ 61832567 (+)
G1759841 NA non-coding downstream 11611 61839595 ~ 61845189 (+)
G1759845 NA non-coding downstream 23768 61851752 ~ 61853345 (+)
G1759854 NA non-coding downstream 41185 61869169 ~ 61869840 (+)
G1759898 NA non-coding downstream 69494 61897478 ~ 61897946 (+)
G1759267 NA other upstream 1016936 60810202 ~ 60810620 (+)
G1759168 LOC101154678 other upstream 1105084 60722158 ~ 60722472 (+)
G1758786 NA other upstream 1468205 60358349 ~ 60359351 (+)
G1758818 NA other upstream 1474522 60351646 ~ 60353092 (+)
G1758801 NA other upstream 1500936 60322215 ~ 60326620 (+)
G1760504 NA other downstream 907067 62689513 ~ 62741819 (+)
G1760587 NA other downstream 983791 62811775 ~ 62814241 (+)
LOC110500953 LOC106594432 other downstream 1045697 62873681 ~ 62903536 (+)
LOC110500813 tsc22d4 other downstream 1163186 62991115 ~ 63050683 (+)
G1760800 NA other downstream 1382149 63210133 ~ 63215753 (+)

Expression


Co-expression Network