G1759898


Basic Information

Item Value
gene id G1759898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 61897478 ~ 61897946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2015397
atagctaactgactatatagctaggtgactatatagctaggtgactatatagctaggtgactatatagctaactaactatatagctaggtgactatatagctaactaactatatagctaggtgactatatagctaactaactatatagctaggtgactatatagctaggtgactatatagctagctgactatatagctaggtgactatatagctaggtgactatatagctaggtgactatatagctagctaactatatagctaggtgactatatagctaggtgactatatagctagctaactatatagctaggtgactatatagctagctaactatatagctaggtgactatatagctagctgactatatagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2015397 True 373 lncRNA 0.35 3 61897478 61897946

Neighbor

gene id symbol gene type direction distance location
LOC110531293 LOC108431879 coding upstream 92987 61725825 ~ 61804491 (+)
LOC110500905 LOC106608450 coding upstream 973387 60900777 ~ 60924091 (+)
LOC118942964 NA coding upstream 1087794 60808485 ~ 60809684 (+)
LOC118942963 NA coding upstream 1093940 60802393 ~ 60803538 (+)
LOC118942966 NA coding upstream 1117636 60778559 ~ 60779842 (+)
LOC118942795 NA coding downstream 88520 61984438 ~ 61987741 (+)
LOC110512266 NA coding downstream 94825 61992771 ~ 61994235 (+)
LOC118942970 NA coding downstream 130259 62027815 ~ 62032638 (+)
LOC118942796 LOC106578155 coding downstream 170448 62068394 ~ 62076250 (+)
fga LOC106608433 coding downstream 320670 62218616 ~ 62246175 (+)
G1759854 NA non-coding upstream 27638 61869169 ~ 61869840 (+)
G1759845 NA non-coding upstream 44133 61851752 ~ 61853345 (+)
G1759841 NA non-coding upstream 52289 61839595 ~ 61845189 (+)
G1759837 LOC106592087 non-coding upstream 64911 61830015 ~ 61832567 (+)
G1759836 NA non-coding upstream 69494 61827556 ~ 61827984 (+)
G1759900 NA non-coding downstream 4118 61902064 ~ 61903950 (+)
G1759902 NA non-coding downstream 8581 61906527 ~ 61906874 (+)
G1759905 NA non-coding downstream 79881 61977827 ~ 61978137 (+)
G1759906 NA non-coding downstream 80369 61978315 ~ 61978533 (+)
G1759907 NA non-coding downstream 82232 61980178 ~ 61980422 (+)
G1759267 NA other upstream 1086858 60810202 ~ 60810620 (+)
G1759168 LOC101154678 other upstream 1175006 60722158 ~ 60722472 (+)
G1758786 NA other upstream 1538127 60358349 ~ 60359351 (+)
G1758818 NA other upstream 1544444 60351646 ~ 60353092 (+)
G1758801 NA other upstream 1570858 60322215 ~ 60326620 (+)
G1760504 NA other downstream 837105 62689513 ~ 62741819 (+)
G1760587 NA other downstream 913829 62811775 ~ 62814241 (+)
LOC110500953 LOC106594432 other downstream 975735 62873681 ~ 62903536 (+)
LOC110500813 tsc22d4 other downstream 1093224 62991115 ~ 63050683 (+)
G1760800 NA other downstream 1312187 63210133 ~ 63215753 (+)

Expression


Co-expression Network