Gene
RNA
| Item | Value |
|---|---|
| gene id | G1761094 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 64086035 ~ 64086658 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2017169 | False | 522 | lncRNA | 0.46 | 2 | 64086035 | 64086658 |
| TU2017173 | True | 522 | lncRNA | 0.46 | 2 | 64086035 | 64086658 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tfr2 | LOC106592655 | coding | upstream | 20251 | 63893194 ~ 64066184 (+) |
| ctc1 | LOC106595900 | coding | upstream | 206053 | 63832555 ~ 63879982 (+) |
| zgc:158659 | pik3ca | coding | upstream | 272278 | 63664023 ~ 63813757 (+) |
| LOC110503296 | LOC106592207 | coding | upstream | 430544 | 63608671 ~ 63655491 (+) |
| LOC118942978 | NA | coding | upstream | 551473 | 63528908 ~ 63534562 (+) |
| LOC110510008 | LOC106562799 | coding | downstream | 461284 | 64547942 ~ 64579984 (+) |
| LOC110509408 | LOC106592366 | coding | downstream | 578905 | 64665563 ~ 64705116 (+) |
| LOC118942982 | NA | coding | downstream | 623707 | 64705596 ~ 64715802 (+) |
| LOC110500801 | LOC106608413 | coding | downstream | 647998 | 64734656 ~ 64754522 (+) |
| LOC118942983 | NA | coding | downstream | 667950 | 64754608 ~ 64760958 (+) |
| G1761092 | NA | non-coding | upstream | 7816 | 64077733 ~ 64078219 (+) |
| G1761042 | NA | non-coding | upstream | 116971 | 63968124 ~ 63969064 (+) |
| G1761051 | NA | non-coding | upstream | 147197 | 63902830 ~ 63938838 (+) |
| G1761103 | NA | non-coding | downstream | 25984 | 64112642 ~ 64113747 (+) |
| G1761111 | NA | non-coding | downstream | 43261 | 64129919 ~ 64179023 (+) |
| G1761113 | NA | non-coding | downstream | 60385 | 64147043 ~ 64148392 (+) |
| G1761117 | NA | non-coding | downstream | 67428 | 64154086 ~ 64154796 (+) |
| G1761120 | NA | non-coding | downstream | 76605 | 64163263 ~ 64163935 (+) |
| G1760941 | NA | other | upstream | 534543 | 63549905 ~ 63551492 (+) |
| G1760865 | NA | other | upstream | 667776 | 63396272 ~ 63418259 (+) |
| si:ch73-265d7.2 | NA | other | upstream | 713864 | 63363590 ~ 63372213 (+) |
| G1760800 | NA | other | upstream | 870282 | 63210133 ~ 63215753 (+) |
| G1761231 | NA | other | downstream | 330779 | 64417437 ~ 64418064 (+) |
| LOC110517355 | NA | other | downstream | 719988 | 64806646 ~ 64842255 (+) |
| G1762135 | NA | other | downstream | 780764 | 64867422 ~ 64867665 (+) |
