XLOC_037166


Basic Information

Item Value
gene id XLOC_037166
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 26694823 ~ 26697305 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075121
ccatgATATTGGAGGACTCCGCGCACGCGGCCACGCGCAGCGCGtcacttcacttaattacgaacacctgacctgcagtgcagcagaattcagaggtaagcgtgtttttagatgctttaacgttttatttaccccccgatTTTGTCAGTGTATCTTAAACGTGACTTTTGAggtgtagtgtttcgaattttgaagcatttaaaactttccagtttggtttttagtcttgtttgcgctccggtgacgcgcagctaacctcgaggtaatgtcacatgtttagttagtctaaatgagcgtttttatggcaaattcaaagcgataaactccaaacgcagtttaaagttactgagcaacgttataaaacaatataaattttatacgctgtattattagtgttattattacaaagttaactgctgtcgtttcactgttgttgttgtttttgcttttagacatgtaagttaacttactccagagacgcactaacttgcacagcattgaatggaaaaggctttgtccatgtaagtttactttacctttaactatctgttaaatcttcttggtgctttggttggtgatattctctttctaatctgtttgtttattgattgttaggctatgttgtgatattatattgttatattgatattattattgtgaaatcatgttgtgatgttatactatgtgacagtattggggaacaaatatgtatttagtgagaaattaatgcttaaattacactttgtatagtaGCAGATAGGAGATGTAATGGGTTTTAACTTTCTGAGTTTTCTGGAAGGACCAGTTGAGGGGCATCAAGAACATGCAGATGGCCTAAACCTGTGTCAGCCTGGACTGACTGCAGTTCTGCTACTCCACAccaaggcttttgtatggatgtctgactactactgtgttctctaaatgtattactggagcaaaacaacagc
>TCONS_00073169
acttcacttaattacgaacacctgacctgcagtgcagcagaattcagagacatgtaagttaacttactccagagacgcactaacttgcacagcattgaatggaaaaggctttgtccatGACCAGTTGAGGGGCATCAAGAACATGCAGATGGCCTAAACCTGTGTCAGCCTGGACTGACTGCAGTTCTGCTACTCCACAccaaggcttttgtatggatgtctgactactactgtgttctctaaatgttttctggaagctccatttgaggtcatcaaggacatactgatggtctaaaccagtgtcagcctagacagacagacatctattgcagttctgctacacaagaccaaactctctgcttttgtatggatgtctgactagtacggtgttctctaaaggtataactggagcaaaacaacagcacctgttacagtgaaatttgtgttcataaaagattGTGATATATCAGGTATAgtaacaggtccagtacatttgtcataaaggttaaatcacagtaagtactgtaaaaataacttgtttgcctttgccacaacaggtcatggtgtgtgcatactgctcgtagtaaacacacacgctgatctgatgcgggagagatatatgcaaacacatttgtatttactgttttgttttgcctcactaaagtgttgttggagcttggtatgttcacagttgaaatcactgaagtcacatggaacgttttgacaatgtgttttgtgccttatcttgacaatgaccatcttgggaccattgctgtctgtagaggatgagaaaatattttagtttgtgttttgaagattAACAAGTCTCTGGGATgac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko03070 Bacterial secretion system
ko05164 Influenza A
ko03200 Viral proteins

Ensembl:

ensembl_id ENSDARG00000093537

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075121 False 950 lncRNA 0.38 1 26694823 26695772
TCONS_00073169 True 838 processed_transcript 0.41 4 26694869 26697305

Neighbor

gene id symbol gene type direction distance location
XLOC_037164 NA coding upstream 119947 26571229 ~ 26574876 (+)
XLOC_037163 si:dkey-111i23.1 coding upstream 190371 26199624 ~ 26504452 (+)
XLOC_037162 NA coding upstream 503399 26185088 ~ 26191424 (+)
XLOC_037161 efnb2a coding upstream 567518 26103814 ~ 26127305 (+)
XLOC_037160 arglu1a coding upstream 598197 26086135 ~ 26096626 (+)
XLOC_037167 FP101883.1 coding downstream 199480 26896785 ~ 27225134 (+)
XLOC_037168 BX928746.1 coding downstream 585017 27282322 ~ 27282436 (+)
XLOC_037169 NA coding downstream 603359 27300664 ~ 27301565 (+)
XLOC_037170 NA coding downstream 617646 27314951 ~ 27323715 (+)
XLOC_037171 GTPBP8 coding downstream 632335 27329640 ~ 27337185 (+)
XLOC_037159 NA non-coding upstream 662714 26028731 ~ 26032109 (+)
XLOC_037158 CR925716.1 non-coding upstream 838094 25856613 ~ 25856729 (+)
XLOC_037156 NA non-coding upstream 857074 25565740 ~ 25837749 (+)
XLOC_037173 NA non-coding downstream 651325 27348630 ~ 27349361 (+)

Expression


Co-expression Network