XLOC_037160 (arglu1a)


Basic Information

Item Value
gene id XLOC_037160
gene name arglu1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 26086135 ~ 26096626 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073159
AGTACTTCTCTCCTCGTATCCTTCACTCGTTGTCAACACGAAAATAGCCGGAAAAAGCCGAGCCCGTTGCATTCTGGGAAAAAGGAAGACTGAAGGCGGTCGCCATATTGTTTTATTCCGCAGATTCACTGGAGCAGAAAGCAACAAACACTTCTATTAAACGAGGTTATATCAAGCAATTCTACGTTTAACCAACGCACAGCGTTGCATGAAGTTGTCGCAGACCGTGCTGCATTCATAAAAACCCTTCTTAGCGCGTCAATCAGATTTAGTTGTGCAAAATATGGGACGCTCAAGGAGCCGCAGCTCGTCCCGGTCCAAACACTCAAAACACAGCCGCAAACGGAGCCGCTCCAAATCCAAATCTAAGAAAAGGAGCAGGTCGAAGGAGCCAAAGAGGAACAGACGGTCCCGCTCAAGATCCGGCAGCAGGAGGGACAGAGGAGGCTCACCGCCCGACCGAACAGACATGTTCGGCCGGACACTGAGCAAGAGAAACAACGACGAAAAACAGAAGAGAGAAGAGGAGGACAGGAGAGTAGAGATTGAGAGGCAGAGGAAGATCCGTCAGCAGGAGATCGAGGAGCGTCTGATCGAGGAGGAGACGGCCAGGCGTGTGGAGGAGCTTGTGGCGCGACGAGTGGAGGAGGAACTGGAGAAGCGGCGTGATGAGATTGAACATGAGGTCTTACGGCGAGTGGAGGAGGCCAAACGCATCATGGAAGCACAGCTTTTGCAGGAGCTAGAGAGGCAGAGGCAGGCTGAACTGAACGCCCAGAAAGCCAGAGAGGAGGAAGAGAAATCCAAACGAGTGGAGCTCGAGAGAATTTTGGAAGAAAACAACCGAAAGATTGCTGATGCTCAGGCTAAACTGgCTGAGGATCAGCTACGTATAGTAGAAGAACAAAGGAAAATCCATGAGGAACGCATGAAGCTTGAACAGGAGAGGCAGAAACAACAGAAAGAGGAACAGAAGATGATATTGGGGAAGGGCAAGTCCCGACCTCGTCTCTCCTTCTCTCTCAAAGCTACAGAGTgatttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttcggATGTGAGCTTCATGTTGAAGTGAATCAGAGTCTCAAAGAGAGTTCTGCCCTGTGTGCTCTGCCCTCAAGAATTGCCCTTCATAATCCCAggaattcaaaaaagaaaaaaaacatttggtcCTCATGCTTCAAAATCGGACTTGCAGCAGCACCACCACAGACTTTCAAATTGGCTGCCATCATTTGCAATTCTTCAATGTATTATATTGATATTTGACACCGTTATGCTGaaggcacatttaaaaaaacagaaaaaaaaaaaaaaaaacagggcaaTTTTCCCTTTTAATGGCAAGCAAATAAGAACGGAAAaagtgtaaatatatttgtgtgtgtgtgcgtggttgCTTGGTCAAAATATATCAGTGGTTTGGGAGCTCTGTTGGTTCAACCTCAATTATTTAACTACTGTTCTAGCATTCTGAGCGGAAGTACACCAACGTGTTTTAAGAAATGTACATTAGCaggcttttggttttgtttatttgtgaacGTTTGTGCAGGAGTGCGAGcgcttttcatgtttttttagaCTGCGGATTGAACCCCTGAAACCATTGAGTTTCTAAAATGCTGCTTAACACTTTGTTCCCATAATCACCTGATCGGAGCTGCATTTCTAGCATTGTAACCTAGATCATATTTGACCTTTTTTGATACATCTTATTTAAAGGacccatttttaaaaacagaatgaaaaaaaaaaa
>TCONS_00073160
GCCATATTGTTTTATTCCGCAGATTCACTGGAGCAGAAAGCAACAAACACTTCTATTAAACGAGGTTATATCAAGCAATTCTACGTTTAACCAACGCACAGCGTTGCATGAAGTTGTCGCAGACCGTGCTGCATTCATAAAAACCCTTCTTAGCGCGTCAATCAGATTTAGTTGTGCAAAATATGGGACGCTCAAGGAGCCGCAGCTCGTCCCGGTCCAAACACTCAAAACACAGCCGCAAACGGAGCCGCTCCAAATCCAAATCTAAGAAAAGGAGCAGGTCGAAGGAGCCAAAGAGGAACAGACGGTCCCGCTCAAGATCCGGCAGCAGGAGGGACAGAGGAGGCTCACCGCCCGACCGAACAGACATGTTCGGCCGGACACTGAGCAAGAGAAACAACGACGAAAAACAGAAGAGAGAAGAGGAGGACAGGAGAGTAGAGATTGAGAGGCAGAGGAAGATCCGTCAGCAGGAGATCGAGGAGCGTCTGATCGAGGAGGAGACGGCCAGGCGTGTGGAGGAGCTTGTGGCGCGACGAGTGGAGGAGGAACTGGAGAAGCGGCGTGATGAGATTGAACATGAGGTCTTACGGCGAGTGGAGGAGGCCAAACGCATCATGGAAGCACAGCTTTTGCAGGAGCTAGAGAGGCAGAGGCAGGCTGAACTGAACGCCCAGAAAGCCAGAGAGGTAACGCTCGGTCGTTCGGAACACAGCGGATCTCAGCCGCAAACCACACGCCCACAGCCGTGCCACAACCTGACACTTGTTTACCCCCGAGACACTGCAGGACCAGCAGGGTAGATGCATTTGAGTAGATTAATAGAGACTAGGCAGTGAAAGTAAATAGTAATGCTTATTTCTTTAAACACATTTATGATATTTTGAGCAGACTGGTTAAGCTGTTGTTTAGGAAATgctaatatttagtttatttctgtaattaaaaataacacagaCAGAATATTGAAGGTCCAAAAGTGACTGTTCACCTAATTTACTTATAGTTTACTTTAAACATCTGCAGTTTCTGATTTATTAGTGAAAAACACCTCATACTATGGATGCAATTAATGACAACCTTTCAAAATAAAGTTCAAATAGTAGGATGCTCCAATCGGGTCTTTTTCCAGTCGATACAGAGTACCggttccttgtcatggtgatcggtcGATACTGAGcactgattctgatgcttcaagctttataatgcatcaagcattttcagttttaagcatgatacttaagtggagatcttgCCTTACCTCAGAGAATAAATTAAAGATGTTGCATATAATTCCTTAAATATTAGAAGCAACTTTAcagaacaaaatagataaaacattttaaaaatgtcaagaAAAATCACTGATaaagcaatttggaaacattgcaaatcatGGAAGAACAACTCAACATGTCTCGGAAGTTTGGAGGGCATTTGTTAAAAAGCAcacctataaatccattacttcttttCTAAGaggaaataaactaaaactggTCCATAAACTACGGTTTATTACAAAGCATATATtactataatttttattattaaatgttcaagtaaaaaattactattttttaatATCCCTTGTATTTCCTGCCAGGATTAAATGAACTTAGAATATAGGTGAGAAcgcaaaaaatacatttctgatATTTCAGTTCTTAtgtgtcctctgcttgtaaactcagaAACAAACAATTGTGATCAGTTCATGAGATCGCCCAGATTAGTGATTATCGGCCGATGCAGATTGGTCAGAGCATTCCTATAAATTATGACAGAAAAACGACTAAACTttgaataaatagtttttaattggACAACAATTGGACATTTTCTTTGTTACTaaaatttaatttagatattGAAATGCAATTCAaagaaactgaaaagaaaatttcATGCAGTTTGGGGCGTGATTTTATTGGTTGCTTAAATAAGGGGATTTTATGATTGagacttatgccgagttcagactgcatgattttcaaagtagtcgtgtcacagatgttttcacactgcatgactatctgggctagtgttttgtcactgctttgtttaaactgcaagatggatcggcgacaggggctttcacattgcatgactttacaataggaagaatcgccgacaacttcgtccaaactacgtctcacagccaaaaacacatagtatatcttttgttgttaactacataacgagaaagatgCCTtaaatggggtagaaaatgtacttatttgttcacctgggtttgaagggaattagcaatttctcctctaCTTTCTTTAACTttatgtatgaaacgtcaaacagacacgggtgctcctgtcaaacctccactcgttttcctccatttcttgggtccaaataaactgaaaaggagcaattttaacttctccccctgcCTCCCGCTGGCCAGCAGGTACACACTAAcaagtaaatgctgctctctcattggctgaagGTGATCGCCGATGatatttcagtcaaaactcatttcacacattAGGATTTGAATCGCAGAcggctccagatatttagcatgccaaatatctcccaggcatcagcgactcattgatgattctctcagatcgcgtctttgatagttcaaactgtgtgattgtcactcacgtgcacaagcATCGATTTGCCTGATATCAGGCATTtctctgcgatttctcaaaacctgtcggcgagtcaaattcggggctaaaatcatgcagtctgaactaggcattagtttACTCTGCACAGAAAAGCTCTGTACTTTATTTCCTAATACTTCAATGTGACTTGACTGAATCAAACGCACCTCAAGTGCCCTCTTGGGGGTTTCAAGTGAATGTTTTGCCACGGCTGTGATAGACCAGTATTACGTTTCtcatctttttcttttcctttttatttccTACCCCTACCCTGCTCCTTTTTTACTCCTATCTTTTATAAGTTTACTGTCACCTATGTATGGAACTGTTTGTCTTCAATAAAACGCTTTTGTTAAAAAGGTCACTCTGCGTTCAAACCAGGCCTGTTTTTGTTCATGAGCTGTCAGTGTGAACATCCGCCATTATACACCTTGAGAGGTCAAGACATAATGCTGTTTCGGATGTTCCAAACACACAAGACCTTTTGAGGCCACCAGACCGCACATAAACTTGTTAATTTGCTTAATCCATAGCTTGTAATTCCACCCATACCGTAAAGGAGGGTTACTGTACTGTAATTGTAAAGACGCAATGAGTTATGAACGGGAAACTAATTCCCTTCCACAAGCACACACAAAATCCAGCGGCTCAGCACTAATAGGGTTAGAAATGTGCCCTCCTTCTGTACGTTTCAGATTTGTGCCCATCATCTGTAGCCCTGGTACTGAACCATTAAATGAATCTGTGTTATTGTAGATTTAGCGTTTGCACATTTTAGCCTCATTTGCAACATTAATCACGAAACGCTCCACTCTTGCTATTGCTGCTCCTCCATTGCtgtcttttgtgttttatattgatttatttttgtaactTCACTTTCCTTTGACTCTTCCGTTCTTCTGACGTCATTAAAAGTGCAgtgttttaaatgtacttttgtgTCTTCACGATTTGCTTTTCCTCAGGAGTGCTGGCATACgggtacacatacacacacatgcaaacacacacacaaacaacaccacacacacaagcCACTGAGCTTAGACGCCAACACAtcactgtttttgttttcagaCCAACACCTCTAACAATTGATCCCACCTTTGTGTTTTTACAGTCTTTAACATCGTTTAACATTAATAGCCTGACGTCCCCACACGGTAATGTTGTATGATTAACATAATTCCTTTTCCTGGACTTTGCTATATATACTGCATGTGGTGTTGCTGTGTAAGAGCACTAGCTCGTGCTAGCAGCTCAGAGATTTTTAAAGGGGAGGTGCTGCGCTGTCCAGGACGGGACACACGGGACCAGGCAGTAAATACTCACCCCCTTTAATCAGCAGTTGTGTAGGTACAGTACACAGTCAAAGGAGAAAGGCGTAGGTATACGAGCATCGGTGAGCCACTACTATTCACTCTCTCCTTTATTTGAGTTAATCTTTCTTTGTCtctctcattttctttttgaaactTCTTGCTTATGGATGctgatagtaaaaaaaaaagaataaaaataaagagagagaTGTAACGAgatgattttattatatttttatctctttttttttcctttctcatctgcaaacgaaTGAGATTCTGCGATAGTTGTCGATGTGTTGTCTTTACATACCTGTTGTGTATGGATGTTAATGAATGTGTAAATAATTGTTTGGATGTCTAAATATTGTGGCGGGGATAAAGGTGTGACTGAATACATCCGTGGGTGGGTTTTTTTGCTCATTGTTGCATACATAGAGGTTAGCTTCAGACTTTTGAATCTGCAGATCGAAATGTGGAGAGCGGGTGAAAGAGTGTGTGAGTGTAGCTGTGTACCTGTTTGTGCAAGTGTAGACATGTTTGAGTGTGCAACGTGAGTTTATGGGGACTTCTTTCATTGGATGTGTTTGCCCTTGCTAACATGTCACCATGTCTCCCCTTTAGGAGGAAGAGAAATCCAAACGAGTGGAGCTCGAGAGAATTTTGGAAGAAAACAACCGAAAGATTGCTGATGCTCAGGCTAAACTGgCTGAGGATCAGCTACGTATAGTAGAAGAACAAAGGAAAATCCATGAGGAACGCATGAAGCTTGAACAGGAGAGGCAGAAACAACAGAAAGAGGAACAGAAGATGATATTGGGGAAGGGCAAGTCCCGACCTCGTCTCTCCTTCTCTCTCAAAGCTACAGAGTgatttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttcggATGTGAGCTTCATGTTGAAGTGAATCAGAGTCTCAAAGAGAGTTCTGCCCTGTGTGCTCTGCCCTCAAGAATTGCCCTTCATAATCCCAggaattcaaaaaagaaaaaaaacatttggtcCTCATGCTTCAAAATCGGACTTGCAGCAGCACCACCACAGACTTTCAAATTGGCTGCCATCATTTGCAATTCTTCAATGTATTATATTGATATTTGACACCGTTATGCTGaaggcacatttaaaaaaacagaaaaaaaaaaaaaaaa

Function

symbol description
arglu1a Predicted to be active in mitochondrion and nucleoplasm. Is expressed in brain. Orthologous to human ARGLU1 (arginine and glutamate rich 1).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005654 nucleoplasm cellular_component
GO:0005739 mitochondrion cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2914 Predicted to be active in mitochondrion and nucleoplasm. Is expressed in brain. Orthologous to human ARGLU1 (arginine and glutamate rich 1).

Ensembl:

ensembl_id ENSDARG00000019223

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073159 False 1822 mRNA 0.45 4 26086135 26096626
TCONS_00073160 True 5195 lncRNA 0.41 3 26086236 26096186

Neighbor

gene id symbol gene type direction distance location
XLOC_037159 NA coding upstream 54026 26028731 ~ 26032109 (+)
XLOC_037157 gtdc1 coding upstream 172151 25840720 ~ 25913984 (+)
XLOC_037158 CR925716.1 coding upstream 229406 25856613 ~ 25856729 (+)
XLOC_037156 NA coding upstream 248386 25565740 ~ 25837749 (+)
XLOC_037155 itm2bb coding upstream 739552 25330905 ~ 25346583 (+)
XLOC_037161 efnb2a coding downstream 7188 26103814 ~ 26127305 (+)
XLOC_037162 NA coding downstream 88462 26185088 ~ 26191424 (+)
XLOC_037163 si:dkey-111i23.1 coding downstream 102998 26199624 ~ 26504452 (+)
XLOC_037164 NA coding downstream 474603 26571229 ~ 26574876 (+)
XLOC_037165 NA coding downstream 507437 26604063 ~ 26795421 (+)
XLOC_037153 NA non-coding upstream 1005830 25079163 ~ 25080305 (+)
XLOC_037152 BX323457.2 non-coding upstream 1011936 25073539 ~ 25074199 (+)
XLOC_037166 NA non-coding downstream 598197 26694823 ~ 26697305 (+)
XLOC_037167 FP101883.1 non-coding downstream 800159 26896785 ~ 27225134 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G93365 NA non-coding NC_048565.1 CM023219.2 83342021 ~ 83342311 (+)
tiger barb (Puntius tetrazona) G69518 NA non-coding NC_056707.1 CM032076.1 11979781 ~ 12009922 (+)