G1798579


Basic Information

Item Value
gene id G1798579
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 31246481 ~ 31292205 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2058247
aaaataaataaaaaaaagaaagctAAATGCAATGCCTGGTTATGAAGTAGGCATGGATAAACTTCAATGCAATCCTAAAATCTATAGCCCTAAAGTTGCTGTCGAAAGTTGTCTGTCTACCTGGACGTGTCCAAACTTAGCGTCACGTAGAAGGAACGAGGAGCGAAAGTCATCTTTCGTGCGTAAAACCAAAACAACAAAGCCGATTCGAATCGAATTCCTAgcgggagacaacgtggagattcCTTTAGTTTTCCCACTGTTCTTTTGTTGCTTATTCCATCGGCGCGTGTGTGATCATATTGCGGGTGGAAGTGGGCTGGGGTGGTGGCTccgctctctctatcccttcctccccaGACCAGTTTGCGCTGCAGTGATTGCTCGCTGGAATCGCAGTGACCGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2058247 True 408 TUCP 0.47 2 31246481 31292205

Neighbor

gene id symbol gene type direction distance location
LOC110502091 LOC106582258 coding upstream 9118 31206388 ~ 31237363 (+)
LOC110501750 LOC106582256 coding upstream 59083 31089015 ~ 31187398 (+)
LOC110501749 LOC106582255 coding upstream 172191 31067493 ~ 31074290 (+)
LOC110501747 LOC106582251 coding upstream 206850 31037126 ~ 31039631 (+)
rl31 rl31 coding upstream 242838 30999685 ~ 31003643 (+)
LOC110501756 LOC106586411 coding downstream 72337 31364542 ~ 31366811 (+)
pde1a LOC106582264 coding downstream 165806 31458011 ~ 31535521 (+)
neurod1 LOC106582267 coding downstream 343305 31635510 ~ 31638598 (+)
cerkl cerkl coding downstream 352215 31644420 ~ 31738039 (+)
cwc22 LOC106582271 coding downstream 801969 32094174 ~ 32144432 (+)
G1798551 LOC100194703 non-coding upstream 54194 31191819 ~ 31192287 (+)
G1798550 NA non-coding upstream 55337 31190791 ~ 31191144 (+)
G1798549 NA non-coding upstream 55744 31190437 ~ 31190737 (+)
G1798487 NA non-coding upstream 72707 31173142 ~ 31173774 (+)
G1798490 NA non-coding upstream 203508 31042748 ~ 31042973 (+)
G1798604 LOC107601366 non-coding downstream 6162 31298367 ~ 31299233 (+)
G1798615 NA non-coding downstream 20887 31313092 ~ 31315028 (+)
G1798661 NA non-coding downstream 86014 31378219 ~ 31415967 (+)
G1799506 NA non-coding downstream 211213 31503418 ~ 31552475 (+)
G1799624 NA non-coding downstream 280044 31572249 ~ 31572454 (+)
G1798397 NA other upstream 355414 30888661 ~ 30891067 (+)
G1798168 NA other upstream 700527 30500656 ~ 30545954 (+)
LOC118943632 LOC100194703 other upstream 1321099 29917773 ~ 29933035 (+)
G1797582 NA other upstream 1501627 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 2236208 28997763 ~ 29010281 (+)
G1798597 NA other downstream 1347 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 1075431 32317123 ~ 32374208 (+)
G1800754 NA other downstream 1618588 32910793 ~ 32914182 (+)
LOC110501795 LOC106596205 other downstream 4448234 35740427 ~ 35760519 (+)
G1804873 NA other downstream 4582357 35874562 ~ 35875452 (+)

Expression


Co-expression Network