XLOC_003813 (si:ch73-303b9.1)


Basic Information

Item Value
gene id XLOC_003813
gene name si:ch73-303b9.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 1547226 ~ 1550709 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007341
TCCACACTTTCCTAATGGACGCAGGACGGGACAGACCTGAGCTGGCCAGAAGCTATGAGGGCCCGTCGTGGTCTGACTTTGACCGAGGTTTTTGCACAGACCAGAGTCTCTCCATTTCCACAGCTTCCTCCGACGGGCTCCTGAAGCCAAACAAAGGCATCGTTCTGGAGTATTCCGAGCCCAATCCTGCAGTCCCTCCATCATTAAACTTCTCCACGGGTCTCCTATCTCCACTTGTGGCCCTCAGTAAAGCTCTTTCTCCAGGAAACGTGCTGAACGCTGCGCTGAAGAGCCCGGTGGAAGGTAAATCCTCCACGCCCTATGAGAGAATGCGCTTCCAGAAACCAGTCCTGGGGAACTCGCTGGACCTCTCCTGTGTGGATCTGACTGCCTCGCACCCTTGCTGGGAGGTGTCTCTGGTAAAGGCCATAGTGGAGAGCCCAAAGTCCTGTTTGGAGTCAACATGGAGCCCCATAAACCAGTCTGCGGCTCCTGAAGCCTCGAATGTGTGGTCGGGGGGAGTTTCAGAGGATCTGCAGAAGTCCTGGAGGGAGATGATCGGTCAGTCTGCAGTGATGCCGGAGCTCAGGGAGAAATGGAGTGAATCTGATCTGGCCATATGATGGATGtgctgttttatgtgtgtgtttaatgcaaCACTTTCAGTGaagaatttataatgttctttttaaagggatagttcacccaaaaatgaacatttctcaGCATTTACTCCCTCAAGCgccttctgtcgaacacaaaacaagatgttcTGAAAAATATTGGCAAACACATTAGGAAACACAACAAATACACTATGGAGATCAATTGCTGTTTTCCAGTATATCCTTctatggcaggggtgtcaaactcaattcctggagggctgcggccctgcacagtttaattccaaccctgcttcaacacacttacctgtaggtttcaaacaagcctgaaggactcaattagtttgatcatctgtgttttaattagggttggaactaaactgtgcagagctgcggccctccaggaattgagtttgacatccctgttcTATGGTATTAAAtagaaaacaagatattttgaagaatgtagatTAAAACCGTCTttgacatccataataggaaCAAAATCACTATGGAGATCAATGGCTTTCCCCCCAGTATGTCATGGTTTTTTGAGCTTAATAGAAGAAACCTTAACCGGTTTTGAAGTGCAGGAGTAAAAATTGAGGatttgtatttttgggtgaactgtctcttttaATATGCTAATTAATTGCACTCATGAATTTGTAAGTGTATGTTTATTACAAGTGTATTTACATGCAAATGTTTtccattaaagaaaataaatatttttaa

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131127-391 No description available

Ensembl:

ensembl_id ENSDARG00000073787

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007341 True 1364 mRNA 0.45 2 1547226 1550709

Neighbor

gene id symbol gene type direction distance location
XLOC_003812 phactr3b coding downstream 37453 1422737 ~ 1509773 (-)
XLOC_003811 si:ch211-266k22.6 coding downstream 137990 1403741 ~ 1409236 (-)
XLOC_003810 rpl29 coding downstream 146592 1396170 ~ 1400634 (-)
XLOC_003809 iars1 coding downstream 154758 1337620 ~ 1392468 (-)
XLOC_003808 atp2b2 coding downstream 256214 1148701 ~ 1291012 (-)
XLOC_003814 NA coding upstream 53019 1603728 ~ 1605287 (-)
XLOC_003815 NA coding upstream 303722 1854431 ~ 1867925 (-)
XLOC_003816 NA coding upstream 360842 1911551 ~ 1915454 (-)
XLOC_003817 NA coding upstream 365254 1915963 ~ 1920521 (-)
XLOC_003818 faim2b coding upstream 375095 1925804 ~ 1935883 (-)
XLOC_003938 BX324177.10 misc upstream 9788095 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 9816885 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 9819746 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 9830195 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 9833124 11383833 ~ 11384130 (-)
XLOC_003806 NA non-coding downstream 458597 1065161 ~ 1088629 (-)
XLOC_003804 NA non-coding downstream 561486 931493 ~ 985740 (-)
XLOC_003803 CABZ01066384.1 non-coding downstream 567478 923795 ~ 979748 (-)
XLOC_003802 NA non-coding downstream 655552 815925 ~ 891674 (-)
XLOC_003799 CABZ01069324.1 non-coding downstream 945918 599440 ~ 601308 (-)
XLOC_003821 NA non-coding upstream 660356 2211065 ~ 2222440 (-)

Expression


Co-expression Network