XLOC_003803 (CABZ01066384.1)


Basic Information

Item Value
gene id XLOC_003803
gene name CABZ01066384.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 923795 ~ 979748 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007326
atttttatttttccccatttatttatgcattttagttgcattatgggatcttgatctttcttccaacaactttcaaCCTTGGAAAGTTATATAAATTAATAAAATGCGTATTAATATACAGCTCATGTTAGAATAGTAATACACAATTAgtctttttatttgtattctcaccggccactttattaggtacacctgtccaactgctcgttaacacacatttctaatcagccaatcacagggcagcagctcactgcatttaggcttttagacatggtcaacaggatctgctacagttcaaagtgcgcatcagaatgggaaaaaaaggggatttaagtgactttgaatgtggcatggttgttagtgcgggctggtctgagtatttcagaaactgctgatctacagggattttcacgcacaaccatctctagggtttgcagagaatgctccgacaaagaggaaatatccagtgagcggcagttctgtgggcgcaaatgccttgttgatgaggccagaggtcagaggagaatggccagactggttccagctgatagaaaggcgacggtaactcaaataagcactcgctacaaccgagctctgcagaagagcatctctgaacacacaacacggccaaccttgaggcggatgggctacagcagcagaagagcacaccgggtgccgctcctgtcagctaagaacaggaaactgaggctacaattcacacagactcaccaaaactggacaatagaagattggagaaacgttgctgctctgatgagtctccatttctgctgacacattcagatgctcggctcacaatttggcctcaacaacatgaaagcatggatcatcctgccttgtatcagcggttcaggctggtggtggtggtgtaatggtgtgggggagattttctttgggtccattagtaccaattgagcatcaacgccacagcctacctgagtattgctgctgaccatgtccatccctttatgagcacagtgtcttcatcttctgatggctacttccagcaggataacgcagcatgtcataaagctcaatcatctcagacttgaacatgacaatgagttcactgtactcaaatggcctccacagtcaccagagctcaatccaatagagcagctttgggatgtggtggaacgggagattggcatcatggatgtgcagccgacgaatctgcagcaactgcgtgatgctatcatgacaatatggagcaaaatctctgaggaatatttccagtagcttgttgaatttatgccaccaaggattaagAACGGTTTCCGCTTTTTGtgttatatgatatgatatactGTACAAGAAATGAGAATATCTAGAGAAatgagtgtgtaaaataacagaaaatgtgctgcagtttattacaaggtttctgcagagtaatatacaacaccaacacactaTATAGCAACGCAGACTATTACACATGTGCAGGAAAGACACTTTTTTAAAACTTTGcaatgttaaaagttgttggaagaaagaccaAGCTTCCACAATGCAattcagaagcagaaataaatgaggaaaaacatgaatctcaggTACTCTGCAAAAATTAATCGCAATTAAAGCTTGttttgcattgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105329

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007326 True 1674 processed_transcript 0.43 4 923795 979748

Neighbor

gene id symbol gene type direction distance location
XLOC_003802 NA coding downstream 32121 815925 ~ 891674 (-)
XLOC_003801 syn2b coding downstream 161074 675296 ~ 762721 (-)
XLOC_003800 pparg coding downstream 254237 609516 ~ 669558 (-)
XLOC_003799 CABZ01069324.1 coding downstream 322487 599440 ~ 601308 (-)
XLOC_003798 tsen2 coding downstream 327290 588017 ~ 596505 (-)
XLOC_003805 slc6a1b coding upstream 17352 997100 ~ 1024483 (-)
XLOC_003806 NA coding upstream 85413 1065161 ~ 1088629 (-)
XLOC_003807 slc6a11b coding upstream 115096 1094844 ~ 1131569 (-)
XLOC_003808 atp2b2 coding upstream 168953 1148701 ~ 1291012 (-)
XLOC_003809 iars1 coding upstream 357872 1337620 ~ 1392468 (-)
XLOC_003938 BX324177.10 misc upstream 10359056 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 10387846 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 10390707 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 10401156 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 10404085 11383833 ~ 11384130 (-)
XLOC_003797 CU695207.2 non-coding downstream 375397 545461 ~ 548398 (-)
XLOC_003793 CR855375.4 non-coding downstream 463865 459815 ~ 459930 (-)
XLOC_003788 NA non-coding downstream 554109 369127 ~ 369686 (-)
XLOC_003814 NA non-coding upstream 623980 1603728 ~ 1605287 (-)
XLOC_003815 NA non-coding upstream 874683 1854431 ~ 1867925 (-)
XLOC_003816 NA non-coding upstream 931803 1911551 ~ 1915454 (-)
XLOC_003817 NA non-coding upstream 936215 1915963 ~ 1920521 (-)

Expression


Co-expression Network