RNA id: TCONS_00007326


Basic Information

Item Value
RNA id TCONS_00007326
length 1674
RNA type processed_transcript
GC content 0.43
exon number 4
gene id XLOC_003803
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 923795 ~ 979748 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

atttttatttttccccatttatttatgcattttagttgcattatgggatcttgatctttcttccaacaactttcaaCCTTGGAAAGTTATATAAATTAATAAAATGCGTATTAATATACAGCTCATGTTAGAATAGTAATACACAATTAgtctttttatttgtattctcaccggccactttattaggtacacctgtccaactgctcgttaacacacatttctaatcagccaatcacagggcagcagctcactgcatttaggcttttagacatggtcaacaggatctgctacagttcaaagtgcgcatcagaatgggaaaaaaaggggatttaagtgactttgaatgtggcatggttgttagtgcgggctggtctgagtatttcagaaactgctgatctacagggattttcacgcacaaccatctctagggtttgcagagaatgctccgacaaagaggaaatatccagtgagcggcagttctgtgggcgcaaatgccttgttgatgaggccagaggtcagaggagaatggccagactggttccagctgatagaaaggcgacggtaactcaaataagcactcgctacaaccgagctctgcagaagagcatctctgaacacacaacacggccaaccttgaggcggatgggctacagcagcagaagagcacaccgggtgccgctcctgtcagctaagaacaggaaactgaggctacaattcacacagactcaccaaaactggacaatagaagattggagaaacgttgctgctctgatgagtctccatttctgctgacacattcagatgctcggctcacaatttggcctcaacaacatgaaagcatggatcatcctgccttgtatcagcggttcaggctggtggtggtggtgtaatggtgtgggggagattttctttgggtccattagtaccaattgagcatcaacgccacagcctacctgagtattgctgctgaccatgtccatccctttatgagcacagtgtcttcatcttctgatggctacttccagcaggataacgcagcatgtcataaagctcaatcatctcagacttgaacatgacaatgagttcactgtactcaaatggcctccacagtcaccagagctcaatccaatagagcagctttgggatgtggtggaacgggagattggcatcatggatgtgcagccgacgaatctgcagcaactgcgtgatgctatcatgacaatatggagcaaaatctctgaggaatatttccagtagcttgttgaatttatgccaccaaggattaagAACGGTTTCCGCTTTTTGtgttatatgatatgatatactGTACAAGAAATGAGAATATCTAGAGAAatgagtgtgtaaaataacagaaaatgtgctgcagtttattacaaggtttctgcagagtaatatacaacaccaacacactaTATAGCAACGCAGACTATTACACATGTGCAGGAAAGACACTTTTTTAAAACTTTGcaatgttaaaagttgttggaagaaagaccaAGCTTCCACAATGCAattcagaagcagaaataaatgaggaaaaacatgaatctcaggTACTCTGCAAAAATTAATCGCAATTAAAGCTTGttttgcattgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000172881

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008727 lncRNA downstream 79969 815925 ~ 843826 (-) False XLOC_003802
TCONS_00008726 lncRNA downstream 100348 815925 ~ 823447 (-) False XLOC_003802
TCONS_00007317 lncRNA downstream 322487 599758 ~ 601308 (-) True XLOC_003799
TCONS_00007316 lncRNA downstream 322492 599440 ~ 601303 (-) False XLOC_003799
TCONS_00007314 lncRNA downstream 353374 566223 ~ 570421 (-) True XLOC_003796
TCONS_00007328 lncRNA upstream 35214 1014962 ~ 1018545 (-) True XLOC_003805
TCONS_00008729 lncRNA upstream 85413 1065161 ~ 1088627 (-) False XLOC_003806
TCONS_00007329 lncRNA upstream 85413 1065161 ~ 1088627 (-) False XLOC_003806
TCONS_00008440 lncRNA upstream 89659 1069407 ~ 1088629 (-) True XLOC_003806
TCONS_00007336 lncRNA upstream 416552 1396300 ~ 1400634 (-) False XLOC_003810
TCONS_00007325 mRNA downstream 32121 878660 ~ 891674 (-) True XLOC_003802
TCONS_00007322 mRNA downstream 33950 843662 ~ 889845 (-) False XLOC_003802
TCONS_00007324 mRNA downstream 48414 872833 ~ 875381 (-) False XLOC_003802
TCONS_00007323 mRNA downstream 59963 849794 ~ 863832 (-) False XLOC_003802
TCONS_00007321 mRNA downstream 79984 816106 ~ 843811 (-) False XLOC_003802
TCONS_00007327 mRNA upstream 17352 997100 ~ 1024483 (-) False XLOC_003805
TCONS_00007331 mRNA upstream 115096 1094844 ~ 1131569 (-) True XLOC_003807
TCONS_00007332 mRNA upstream 168953 1148701 ~ 1291012 (-) True XLOC_003808
TCONS_00007333 mRNA upstream 357872 1337620 ~ 1392468 (-) True XLOC_003809
TCONS_00007334 mRNA upstream 416422 1396170 ~ 1400610 (-) False XLOC_003810
TCONS_00007304 other downstream 463865 459815 ~ 459930 (-) True XLOC_003793
TCONS_00007296 other downstream 572094 349113 ~ 351701 (-) True XLOC_003787
TCONS_00007330 other upstream 89658 1069406 ~ 1088515 (-) False XLOC_003806
TCONS_00007400 other upstream 2973975 3953723 ~ 3953837 (-) True XLOC_003853
TCONS_00007438 other upstream 5092212 6071960 ~ 6072066 (-) True XLOC_003881
TCONS_00007441 other upstream 5217528 6197276 ~ 6206589 (-) False XLOC_003884
TCONS_00007456 other upstream 5800960 6780708 ~ 6782076 (-) True XLOC_003894

Expression Profile

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