XLOC_003894 (BX936438.1)


Basic Information

Item Value
gene id XLOC_003894
gene name BX936438.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 6780708 ~ 6782076 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007456
CACATTTGTTACATTAAGAGGAGATGGAGGGGAACAATTTATTAAGCTTAACTCCAGAATAATGAAGCCGATGTACTACTTTATATTTGATTAGTTGGTGTCTTGAGTTAATAGAACATGTATTTAGGACTTTGATAGACTTTTTCCAGTTCTCATTGGTAATTTGAATGTCTAAATCTTTCTCCCAGGAATCTTTCAAATACAAGGTAGATAtgtcaaacattaaaaatgtctataaaacaggatcaaatcaaaataaagtcatcacgagaaGCAGAAAGTAATTTATATACAACATGTTCATCTGTTAATAGTTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093251

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007456 True 317 processed_transcript 0.31 2 6780708 6782076

Neighbor

gene id symbol gene type direction distance location
XLOC_003893 NA coding downstream 324408 6455034 ~ 6456300 (-)
XLOC_003892 larp6b coding downstream 328216 6446235 ~ 6452492 (-)
XLOC_003891 NA coding downstream 349360 6429973 ~ 6431348 (-)
XLOC_003889 ndufa11 coding downstream 351003 6411169 ~ 6429705 (-)
XLOC_003890 VMAC coding downstream 359791 6417450 ~ 6420917 (-)
XLOC_003895 NA coding upstream 10470 6792546 ~ 6799938 (-)
XLOC_003896 lsm4 coding upstream 77800 6859876 ~ 6868474 (-)
XLOC_003897 ddx49 coding upstream 87236 6869312 ~ 6880725 (-)
XLOC_003898 comp coding upstream 159313 6941389 ~ 6974022 (-)
XLOC_003899 si:ch211-253b8.2 coding upstream 195192 6977268 ~ 6985463 (-)
XLOC_003938 BX324177.10 misc upstream 4556728 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 4585518 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 4588379 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 4598828 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 4601757 11383833 ~ 11384130 (-)
XLOC_003887 NA non-coding downstream 456151 6316654 ~ 6324557 (-)
XLOC_003886 NA non-coding downstream 502010 6276900 ~ 6278698 (-)
XLOC_003882 NA non-coding downstream 684342 6086300 ~ 6096366 (-)
XLOC_003904 CR925817.2 non-coding upstream 334171 7116247 ~ 7116363 (-)
XLOC_003908 NA non-coding upstream 563724 7345800 ~ 7349497 (-)
XLOC_003912 NA non-coding upstream 991756 7773832 ~ 7796332 (-)
XLOC_003920 CR847563.2 non-coding upstream 1694885 8476961 ~ 8515750 (-)

Expression


Co-expression Network