Gene
RNA
| Item | Value |
|---|---|
| gene id | G1983735 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 41967776 ~ 41968068 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2267955 | True | 253 | lncRNA | 0.35 | 2 | 41967776 | 41968068 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504274 | LOC106611444 | coding | upstream | 29997 | 41781271 ~ 41937779 (+) |
| LOC110505959 | LOC106611457 | coding | upstream | 210382 | 41740173 ~ 41757394 (+) |
| LOC110505960 | LOC106611458 | coding | upstream | 230648 | 41677344 ~ 41737128 (+) |
| LOC110505964 | LOC106611459 | coding | upstream | 301714 | 41636156 ~ 41666062 (+) |
| LOC110505965 | trim9 | coding | upstream | 344981 | 41547371 ~ 41622795 (+) |
| LOC110505968 | LOC106591812 | coding | downstream | 86050 | 42054118 ~ 42059358 (+) |
| LOC110505969 | LOC106591813 | coding | downstream | 91627 | 42059695 ~ 42063783 (+) |
| LOC110505970 | LOC106611462 | coding | downstream | 112525 | 42080593 ~ 42092048 (+) |
| LOC110505971 | LOC106611464 | coding | downstream | 127009 | 42095077 ~ 42101228 (+) |
| LOC110505972 | pacs2 | coding | downstream | 139483 | 42107551 ~ 42226673 (+) |
| G1983726 | NA | non-coding | upstream | 19296 | 41948117 ~ 41948480 (+) |
| G1983709 | NA | non-coding | upstream | 23303 | 41944262 ~ 41944473 (+) |
| G1983708 | NA | non-coding | upstream | 23930 | 41942716 ~ 41943846 (+) |
| G1983706 | NA | non-coding | upstream | 25732 | 41941804 ~ 41942044 (+) |
| G1983704 | NA | non-coding | upstream | 28166 | 41939352 ~ 41939610 (+) |
| G1983737 | NA | non-coding | downstream | 2520 | 41970588 ~ 41971156 (+) |
| G1983715 | NA | non-coding | downstream | 53340 | 42021408 ~ 42022527 (+) |
| G1983747 | NA | non-coding | downstream | 67247 | 42035315 ~ 42037842 (+) |
| G1983761 | NA | non-coding | downstream | 105267 | 42073335 ~ 42073799 (+) |
| G1983499 | NA | other | upstream | 518436 | 41448402 ~ 41449340 (+) |
| LOC110504259 | LOC106603281 | other | upstream | 617061 | 41297432 ~ 41350749 (+) |
| G1983387 | NA | other | upstream | 751024 | 41215475 ~ 41216752 (+) |
| G1983277 | NA | other | upstream | 919874 | 41047551 ~ 41047902 (+) |
| G1983721 | NA | other | downstream | 94957 | 42063025 ~ 42103896 (+) |
| G1983777 | NA | other | downstream | 264172 | 42232240 ~ 42232904 (+) |
| G1983836 | NA | other | downstream | 294159 | 42262227 ~ 42262714 (+) |
| cn112 | cn112 | other | downstream | 451092 | 42419107 ~ 42454007 (+) |
| LOC110505989 | NA | other | downstream | 754907 | 42722700 ~ 42728639 (+) |
