G2078132


Basic Information

Item Value
gene id G2078132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35736266 ~ 35738529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376024
aaaacactacacaacactacACAACACATATCatgactacacaacactacaccacacaacacaaaacaacactacacatgactacacaacacaacattgAGACACTACACTAcgcaacactacacaacacttagacactacacaacacaacactgagacaCTACACAACACTGAGAAACTAcaccacacaacactacacaacaccaacatactacactacacaacacttagacactacacaacacaacactacacaacactaagatactacactacacaacactgatagactacactacacaacaaaacacaacacttCACAACACTGGGactacaccacacaacacaacactgacaaCTACACAACACTAAGACACTACAACACTGAGACAATACActtcacaacacaacactgagacactgcacaacactacacaacactaagaCAATACACAGCACCACACAACACtgagacactacactacacaacattaCACAGCACTGAGACACTACATGCCATTACaagacactacacaacacactctACAACACTATACTAAGACACTTTACAACATTAAGACACTACACTAGACAATACTACACAGCACTACACACCATTAAGACAAAACACTAGACAATACCACACAGCACTATACAACACTAAgacaaacacaacacactacCAAGACACTTCACAACACTaagacactacacaacactagacaacaatacacaacactacacaacactaagaCACTACACTAAAACACTCCACAACACTATACTAAGACACTTTACAACATTAAGACACTGCACTAGACAATACTACACAGCACTACACACCATTAAGACACTACACTAGACAATACCACACAGCACTACAAAACACTAagacaaacacaacacaacacactacactactaagacacaacacaacactaagacacaacacaacacaacactaagacactacacaacactacacaacactaagacactacactacacaccactaAGACACTTCACAACACTACACACCAATACAAACCTACACAGTGCTTTATAATCTGCACAGTTTCTCAAGGCTCTCATAAAACAGAAAACAGATGGTgaatcagagagagggacagagcgaaaagagacagagtgaatggcaatttggatttttactaaatGATCGTaagacagaccacgtattcaccctgctaaccctaattgacaaaaaaaacaaaccaaaacaaaggcaaagtcatctcatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376024 True 1259 lncRNA 0.39 2 35736266 35738529

Neighbor

gene id symbol gene type direction distance location
LOC110507975 LOC106581363 coding upstream 217157 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 571807 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 625224 35014631 ~ 35111042 (+)
cwf19l2 cwf19l2 coding upstream 726462 34970520 ~ 35009804 (+)
rtor1 rtor1 coding upstream 782132 34953147 ~ 34954134 (+)
LOC110507976 LOC106581370 coding downstream 66005 35804534 ~ 35822884 (+)
LOC110507977 fzd4 coding downstream 266896 36005425 ~ 36012334 (+)
naalad2 LOC106581411 coding downstream 627126 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 699696 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 715232 36453761 ~ 36546497 (+)
G2078110 NA non-coding upstream 23321 35712557 ~ 35712945 (+)
G2078072 NA non-coding upstream 65957 35669777 ~ 35670309 (+)
G2077979 NA non-coding upstream 199091 35536895 ~ 35537175 (+)
G2077758 NA non-coding upstream 199406 35438034 ~ 35536860 (+)
G2078155 NA non-coding downstream 15718 35754247 ~ 35754483 (+)
G2078171 NA non-coding downstream 45929 35784458 ~ 35786196 (+)
G2078238 NA non-coding downstream 101184 35839713 ~ 35839914 (+)
G2078240 NA non-coding downstream 106610 35845139 ~ 35850835 (+)
G2078251 NA non-coding downstream 128347 35866876 ~ 35868803 (+)
G2078087 NA other upstream 43433 35684135 ~ 35692833 (+)
G2077777 NA other upstream 222753 35470330 ~ 35513513 (+)
G2077547 NA other upstream 589597 35146144 ~ 35146669 (+)
G2078188 NA other downstream 59043 35797572 ~ 35797990 (+)
G2078253 NA other downstream 131956 35870485 ~ 35871733 (+)
G2078296 NA other downstream 193586 35932115 ~ 35932509 (+)
G2078382 NA other downstream 294756 36033285 ~ 36033999 (+)
G2078425 NA other downstream 364345 36102874 ~ 36104101 (+)

Expression


Co-expression Network