G2078240


Basic Information

Item Value
gene id G2078240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35845139 ~ 35850835 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376140
ctttatgtagtgttgtggagtctctctttatgtagtgttgtgttgtcttcatgtagtgttgtggagtctctctttatgtagtgttgtggagtctctctttatgtagtgttgtggtgtctctctttatgtagtgttgtggtgtctctctttatgtagtattgtggagtctctctttatgtagtgttgtggagtctctctttatgtagtgttgtggagtctctctttatgtagtgttgtggagtctctctttatgtagtgttgtggagtctctctttatgtagtgttgtggtgtctctctttatgtagtgttgtggt
>TU2376141
attttatgtagtgttgtggtgtctttatgtagtgttgtggtgtctttatgtagtgttgtggtgtctctctttatgtagtattgtggagtctctatgtagtgttgtggtgtctctctttatgtagtgctgtggagtctctctttatgtagtgatgtgttttctctctttatgtagtgttgtggtgcctctctttatgtagtgttgtggagtctctctttatgtagtgttgtggagtctctctttatgtagtgttgtgttgtctctctttatgtagtgttgtgttgtctctctttatgtagtgttgtgttgtctctctttatatagtgttgtggagtctctctttatgtagtgttgtggagtctctctttatgtagtgttgtggagtctctctttatgtagtgttgtggagtctctctttatgtagtgttgtggtgtctctctttatgtagtgttgtggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376140 False 315 lncRNA 0.39 2 35845139 35850835
TU2376141 True 458 lncRNA 0.38 2 35847001 35850835

Neighbor

gene id symbol gene type direction distance location
LOC110507976 LOC106581370 coding upstream 22255 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 326030 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 680680 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 734097 35014631 ~ 35111042 (+)
cwf19l2 cwf19l2 coding upstream 835335 34970520 ~ 35009804 (+)
LOC110507977 fzd4 coding downstream 154590 36005425 ~ 36012334 (+)
naalad2 LOC106581411 coding downstream 514820 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 587390 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 602926 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 759900 36610735 ~ 36618726 (+)
G2078238 NA non-coding upstream 5225 35839713 ~ 35839914 (+)
G2078171 NA non-coding upstream 58943 35784458 ~ 35786196 (+)
G2078155 NA non-coding upstream 90656 35754247 ~ 35754483 (+)
G2078132 NA non-coding upstream 106610 35736266 ~ 35738529 (+)
G2078133 NA non-coding upstream 107944 35736698 ~ 35737195 (+)
G2078251 NA non-coding downstream 16041 35866876 ~ 35868803 (+)
G2078255 NA non-coding downstream 23585 35874420 ~ 35876639 (+)
G2078290 NA non-coding downstream 76263 35927098 ~ 35927438 (+)
G2078294 NA non-coding downstream 80644 35931479 ~ 35931686 (+)
G2078295 NA non-coding downstream 80977 35931812 ~ 35932026 (+)
G2078188 NA other upstream 47149 35797572 ~ 35797990 (+)
G2078087 NA other upstream 152306 35684135 ~ 35692833 (+)
G2077777 NA other upstream 331626 35470330 ~ 35513513 (+)
G2077547 NA other upstream 698470 35146144 ~ 35146669 (+)
G2078253 NA other downstream 19650 35870485 ~ 35871733 (+)
G2078296 NA other downstream 81280 35932115 ~ 35932509 (+)
G2078382 NA other downstream 182450 36033285 ~ 36033999 (+)
G2078425 NA other downstream 252039 36102874 ~ 36104101 (+)
G2078493 NA other downstream 450103 36263506 ~ 36302664 (+)

Expression


Co-expression Network