G2078294


Basic Information

Item Value
gene id G2078294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35931479 ~ 35931686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376205
GACCAATCAGCATTCAAAGGAGTCCATTCAATGACATCACAAATGTCATGCccccatgaacacacacatactgtactcactaCTAATTGATTTTGTGAGTTTTTATGGATTCGAACACACTGCAGGCTTACATTGATCTGCAACATTAAATTGAAActgaatttagagagagagagagagagagagagagagagagagagagagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376205 True 208 lncRNA 0.40 1 35931479 35931686

Neighbor

gene id symbol gene type direction distance location
LOC110507976 LOC106581370 coding upstream 108595 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 412370 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 767020 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 820437 35014631 ~ 35111042 (+)
cwf19l2 cwf19l2 coding upstream 921675 34970520 ~ 35009804 (+)
LOC110507977 fzd4 coding downstream 73739 36005425 ~ 36012334 (+)
naalad2 LOC106581411 coding downstream 433969 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 506539 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 522075 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 679049 36610735 ~ 36618726 (+)
G2078290 NA non-coding upstream 4041 35927098 ~ 35927438 (+)
G2078255 NA non-coding upstream 54840 35874420 ~ 35876639 (+)
G2078251 NA non-coding upstream 62676 35866876 ~ 35868803 (+)
G2078240 NA non-coding upstream 80644 35845139 ~ 35850835 (+)
G2078238 NA non-coding upstream 91565 35839713 ~ 35839914 (+)
G2078295 NA non-coding downstream 126 35931812 ~ 35932026 (+)
G2078331 NA non-coding downstream 31508 35963194 ~ 35963483 (+)
G2078346 NA non-coding downstream 59677 35991363 ~ 35991577 (+)
G2078347 NA non-coding downstream 60483 35992169 ~ 35992463 (+)
G2078351 NA non-coding downstream 66367 35998053 ~ 35998391 (+)
G2078253 NA other upstream 59746 35870485 ~ 35871733 (+)
G2078188 NA other upstream 133489 35797572 ~ 35797990 (+)
G2078087 NA other upstream 238646 35684135 ~ 35692833 (+)
G2077777 NA other upstream 417966 35470330 ~ 35513513 (+)
G2078296 NA other downstream 429 35932115 ~ 35932509 (+)
G2078382 NA other downstream 101599 36033285 ~ 36033999 (+)
G2078425 NA other downstream 171188 36102874 ~ 36104101 (+)
G2078493 NA other downstream 369252 36263506 ~ 36302664 (+)

Expression


Co-expression Network