G2077979


Basic Information

Item Value
gene id G2077979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35536895 ~ 35537175 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2375847
ATACAATATTTAACTAAGTTAAATCAAACCCTAAAATGTACCATAACCAGTAACCAAATAAACAAACCACTTTTATCAGCAAAAAACAAACTACACCAAAACTCACTACTATAATGGTTCAGATGACAAAATTACTCAGAGACTCACGTTTACATCTCAATAAAACAAATCATCATCTGCTTGCCCCTGTTACAGATGTCTACGTATCAGGGGAAaagctcaaataaccaaattcaacctagctaatttcccgAAACATATGCAGTTATGTTTTTCTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2375847 True 281 lncRNA 0.33 1 35536895 35537175

Neighbor

gene id symbol gene type direction distance location
LOC110507975 LOC106581363 coding upstream 17786 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 372436 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 425853 35014631 ~ 35111042 (+)
cwf19l2 cwf19l2 coding upstream 527091 34970520 ~ 35009804 (+)
rtor1 rtor1 coding upstream 582761 34953147 ~ 34954134 (+)
LOC110507976 LOC106581370 coding downstream 267359 35804534 ~ 35822884 (+)
LOC110507977 fzd4 coding downstream 468250 36005425 ~ 36012334 (+)
naalad2 LOC106581411 coding downstream 828480 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 901050 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 916586 36453761 ~ 36546497 (+)
G2077758 NA non-coding upstream 35 35438034 ~ 35536860 (+)
G2077771 NA non-coding upstream 40761 35494087 ~ 35496134 (+)
G2077764 NA non-coding upstream 62273 35446372 ~ 35474622 (+)
G2077754 NA non-coding upstream 103685 35432971 ~ 35433210 (+)
G2077749 NA non-coding upstream 107052 35423236 ~ 35429843 (+)
G2078072 NA non-coding downstream 132602 35669777 ~ 35670309 (+)
G2078110 NA non-coding downstream 175382 35712557 ~ 35712945 (+)
G2078132 NA non-coding downstream 199091 35736266 ~ 35738529 (+)
G2078133 NA non-coding downstream 199523 35736698 ~ 35737195 (+)
G2078155 NA non-coding downstream 217072 35754247 ~ 35754483 (+)
G2077777 NA other upstream 23382 35470330 ~ 35513513 (+)
G2077547 NA other upstream 390226 35146144 ~ 35146669 (+)
G2076102 NA other upstream 822339 34712576 ~ 34714556 (+)
G2078087 NA other downstream 146960 35684135 ~ 35692833 (+)
G2078188 NA other downstream 260397 35797572 ~ 35797990 (+)
G2078253 NA other downstream 333310 35870485 ~ 35871733 (+)
G2078296 NA other downstream 394940 35932115 ~ 35932509 (+)
G2078382 NA other downstream 496110 36033285 ~ 36033999 (+)

Expression


Co-expression Network