G2077771


Basic Information

Item Value
gene id G2077771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35494087 ~ 35496134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2375593
ctcagccaatcatggctagcaggaaggttgctctcgctttttctgtggctaaaccaactatgcTTGTAATTTCACAATTGTATTTGTATCTACAGATGTCATACATACATAGCACTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTACGTTTTCACAGAGCATTAGGAGGAATATAATCGCAGAGCACTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGAATATAATCGTAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGAATATAATCGCAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGAATATAATCGCAGAGCACTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGAATATAATCGCAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCACTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCACTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGAATATAATCGCAGAGCATTAGAAGGACTATGTAGTCACAGAGCATTAGGACTATGTAGTCACAGAGCATTAGGACTATGTAGTCACAGAGCATTAGGACTATGTAGTCACAGAACATTAGGACTATTTAGTCACAGAGCATTAGGAGGACTATGTAGTCGCAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGACTATGTAGTCGCAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGACTATGTAGTCACAGAGCATTATGACTATGTAGTCATAGAGCATTAGGACTATGTAGTCATAGAGCATTAGGACTATGTAGTCATAGAGCATTAGGACTATGTAGTCACAGAGCATTAGGACTATGTAGTCACAGAGCATTAGGACTATGTAGTCACAGAGCATTAGGACTATGTAggaatataaactgtatttatttgaACAGCTTAATTTACTGTTattctttgtctgtctctctctcgctggctctctggctctgtccctgtctctctgtctctctctctttctctgtctttctctctctctctgtgtctcgctctctctctgtctctcttctcgctcgctctctcttcttgctctctctctcttctctctctctctctctgtctcgctctctctctc
>TU2375594
ctcagccaatcatggctagcaggaaggttgctctcgctttttctgtggctaaaccaactatgcTTGTAATTTCACAATTGTATTTGTATCTACAGATGTCATACATACATAGCACTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTACGTTTTCACAGAGCATTAGGAGGAATATAATCGCAGAGCACTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGAATATAATCGTAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGAATATAATCGCAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGAATATAATCGCAGAGCACTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGAATATAATCGCAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATGTAGTCACAGAGCATTAGGAGGACTATAGTCACAGAGCATTAGGACTATGTAGTCACAGAGCATTAGGACTATGTAggaatataaactgtatttatttgaACAGCTTAATTTACTGTTattctttgtctgtctctctctcgctggctctctggctctgtccctgtctctctgtctctctctctttctctgtctttctctctctctctgtgtctcgctctctctctgtctctcttctcgctcgctctctcttcttgctctctctctcttctctctctctctctctgtctcgctctctctctc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572393 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2375593 False 1654 lncRNA 0.43 5 35494087 35496134
TU2375594 True 1039 lncRNA 0.44 3 35494087 35496134

Neighbor

gene id symbol gene type direction distance location
LOC110507973 LOC106581395 coding upstream 329628 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 383045 35014631 ~ 35111042 (+)
cwf19l2 cwf19l2 coding upstream 484283 34970520 ~ 35009804 (+)
rtor1 rtor1 coding upstream 539953 34953147 ~ 34954134 (+)
LOC110507209 LOC106581391 coding upstream 551880 34941254 ~ 34942207 (+)
LOC110507976 LOC106581370 coding downstream 308400 35804534 ~ 35822884 (+)
LOC110507977 fzd4 coding downstream 509291 36005425 ~ 36012334 (+)
naalad2 LOC106581411 coding downstream 869521 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 942091 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 957627 36453761 ~ 36546497 (+)
G2077764 NA non-coding upstream 19465 35446372 ~ 35474622 (+)
G2077754 NA non-coding upstream 60877 35432971 ~ 35433210 (+)
G2077749 NA non-coding upstream 64244 35423236 ~ 35429843 (+)
G2077731 NA non-coding upstream 114010 35379799 ~ 35380077 (+)
G2077637 NA non-coding upstream 322736 35169243 ~ 35171351 (+)
G2077979 NA non-coding downstream 40761 35536895 ~ 35537175 (+)
G2078072 NA non-coding downstream 173643 35669777 ~ 35670309 (+)
G2078110 NA non-coding downstream 216423 35712557 ~ 35712945 (+)
G2078132 NA non-coding downstream 240132 35736266 ~ 35738529 (+)
G2078133 NA non-coding downstream 240564 35736698 ~ 35737195 (+)
G2077547 NA other upstream 347418 35146144 ~ 35146669 (+)
G2076102 NA other upstream 779531 34712576 ~ 34714556 (+)
G2076000 NA other upstream 991382 34502249 ~ 34502705 (+)
robo1 robo1 other upstream 1559186 33391192 ~ 33935721 (+)
G2078087 NA other downstream 188001 35684135 ~ 35692833 (+)
G2078188 NA other downstream 301438 35797572 ~ 35797990 (+)
G2078253 NA other downstream 374351 35870485 ~ 35871733 (+)
G2078296 NA other downstream 435981 35932115 ~ 35932509 (+)
G2078382 NA other downstream 537151 36033285 ~ 36033999 (+)

Expression


Co-expression Network