G2081129


Basic Information

Item Value
gene id G2081129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 38980552 ~ 38981011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2379664
GCATGAACCTATAGATACACCAATCTGGTCCAGCATGAACCTACAGATACACCAATCTGGTCCAGCATGAATTTATAGCTACACCAATCTGGTCCAGAATGCATGAATCTATAGCTACACCAATCTGGTCAAGCATGCATCTATAGCTGCACCAATCTGGTCAAGCATGCATCTATAGCTACACCAATCAGGTCCAGCATGAATCTATAGATGCACCAATCAGGTCCCGCATGAATCTATAGATGCACCAATCAGGTCCAGCATGAATGTATACATACACCAATCAGGTCCAGCATGAATGTATAGATACACCAATCTGGTGCATCACTTGATTCTCAAAGAATAATAATTCTATGCTTAGTATTTCTTCTCTCTGTAACCAGAATTGTCATTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2379664 True 396 lncRNA 0.41 2 38980552 38981011

Neighbor

gene id symbol gene type direction distance location
LOC110508002 LOC106581401 coding upstream 352382 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 505953 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 920439 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 1411679 37536529 ~ 37568873 (+)
trnat-agu-152 NA coding upstream 1474750 37505729 ~ 37505802 (+)
LOC118944799 NA coding downstream 58562 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 686978 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 713550 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 800178 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 1313820 40294831 ~ 40297552 (+)
G2081105 NA non-coding upstream 42429 38937365 ~ 38938123 (+)
G2081076 NA non-coding upstream 79720 38900525 ~ 38900832 (+)
G2081074 NA non-coding upstream 80753 38899101 ~ 38899799 (+)
G2081064 NA non-coding upstream 88040 38892303 ~ 38892512 (+)
G2081063 NA non-coding upstream 88326 38891956 ~ 38892226 (+)
G2081130 NA non-coding downstream 1275 38982286 ~ 38983064 (+)
G2081139 NA non-coding downstream 16559 38997570 ~ 38999983 (+)
G2081369 NA non-coding downstream 238527 39219538 ~ 39222638 (+)
G2081371 NA non-coding downstream 244534 39225545 ~ 39228035 (+)
G2081402 NA non-coding downstream 252835 39233846 ~ 39234578 (+)
G2080014 NA other upstream 1035401 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1161266 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 1612416 37366739 ~ 37368136 (+)
G2079197 NA other upstream 1699720 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 1703695 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 846647 39827658 ~ 39837383 (+)
G2081949 NA other downstream 950863 39931874 ~ 39933835 (+)
G2082162 NA other downstream 976204 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1862503 40840706 ~ 40847141 (+)

Expression


Co-expression Network