Gene
RNA
| Item | Value |
|---|---|
| gene id | G2081139 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 38997570 ~ 38999983 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2379675 | False | 403 | lncRNA | 0.42 | 2 | 38997570 | 38999983 |
| TU2379676 | True | 403 | lncRNA | 0.42 | 2 | 38997570 | 38999983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508002 | LOC106581401 | coding | upstream | 369400 | 38619550 ~ 38628170 (+) |
| LOC110507217 | NA | coding | upstream | 522971 | 38469918 ~ 38474599 (+) |
| LOC110508017 | NA | coding | upstream | 937457 | 38052633 ~ 38060113 (+) |
| LOC110508012 | LOC106581399 | coding | upstream | 1428697 | 37536529 ~ 37568873 (+) |
| trnat-agu-152 | NA | coding | upstream | 1491768 | 37505729 ~ 37505802 (+) |
| LOC118944799 | NA | coding | downstream | 39590 | 39039573 ~ 39039625 (+) |
| LOC110508028 | neus | coding | downstream | 668006 | 39667989 ~ 39681560 (+) |
| LOC110507222 | LOC106581437 | coding | downstream | 694578 | 39694561 ~ 39701212 (+) |
| LOC110507223 | LOC106613251 | coding | downstream | 781206 | 39781189 ~ 39938079 (+) |
| ssr3 | LOC106581450 | coding | downstream | 1294848 | 40294831 ~ 40297552 (+) |
| G2081130 | NA | non-coding | upstream | 14506 | 38982286 ~ 38983064 (+) |
| G2081129 | NA | non-coding | upstream | 16559 | 38980552 ~ 38981011 (+) |
| G2081105 | NA | non-coding | upstream | 59447 | 38937365 ~ 38938123 (+) |
| G2081076 | NA | non-coding | upstream | 96738 | 38900525 ~ 38900832 (+) |
| G2081074 | NA | non-coding | upstream | 97771 | 38899101 ~ 38899799 (+) |
| G2081369 | NA | non-coding | downstream | 219555 | 39219538 ~ 39222638 (+) |
| G2081371 | NA | non-coding | downstream | 225562 | 39225545 ~ 39228035 (+) |
| G2081402 | NA | non-coding | downstream | 233863 | 39233846 ~ 39234578 (+) |
| G2081405 | NA | non-coding | downstream | 235044 | 39235027 ~ 39235275 (+) |
| G2081427 | NA | non-coding | downstream | 249162 | 39249145 ~ 39249364 (+) |
| G2080014 | NA | other | upstream | 1052419 | 37944932 ~ 37945151 (+) |
| G2079657 | NA | other | upstream | 1178284 | 37815848 ~ 37819286 (+) |
| G2079468 | LOC106581367 | other | upstream | 1629434 | 37366739 ~ 37368136 (+) |
| G2079197 | NA | other | upstream | 1716738 | 37279105 ~ 37280832 (+) |
| LOC110536894 | NA | other | upstream | 1720713 | 37031161 ~ 37276857 (+) |
| G2081884 | LOC106581433 | other | downstream | 827675 | 39827658 ~ 39837383 (+) |
| G2081949 | NA | other | downstream | 931891 | 39931874 ~ 39933835 (+) |
| G2082162 | NA | other | downstream | 957232 | 39957215 ~ 39957751 (+) |
| LOC110508042 | LOC106613262 | other | downstream | 1843531 | 40840706 ~ 40847141 (+) |
