G2081402


Basic Information

Item Value
gene id G2081402
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39233846 ~ 39234578 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2379965
catttgtggtgggtagttctgtcacgaacgtcgtcagggaaattaccggaccaaggtgcagcgtgctgAGCATGCATTTCTTCTTATTTTGAATGTCGccaacaagaaacaacaaaaacaaacgtGAAGCTTACTAGAGGTATACTGGCCACTAACAAAGTCATCTACCCACAACTAAGGaggaaaaacaggctgcctaagtatgattcccaatcagagacaacgatagacagctgtccctgattgagaaccataaccggccaaaacatagaaatagaaaacatagaaataaagaaactagaatgcccaccctagtcacaccctggcctaaccaaaacagagaataaaagcctctctatggccagggcgtgacacctatgCATTTTATGTGGATCGATTCAGAGTTCTATTTACCACTCAGATCCAAAATACTCATGTCTTTTTAAAACAAATTCAGTACTGTTTCCGTAATTGACCTATACCAACGCAGACATTTGTAGAAAGCTTTCACCCATCTGATTTAAATTACAACCTGTCCTTACCAATGTAGATGCATTAGTTTGGCCATATTGAAGAGTCCATATTAAACTTCCAGAGTCATTCCTCATcatgtttggttgtgtttcacAGTGTGACTACGGAGCCTGCTGGTCCTATTGAATCTCATcatgtttggttgtgtttcacAGTGTGACTACGAAGCCTGCTGGTCCTATTGAATCTCATcatgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2379965 True 733 lncRNA 0.41 1 39233846 39234578

Neighbor

gene id symbol gene type direction distance location
LOC118944799 NA coding upstream 194221 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 605676 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 759247 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 1173733 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 1664973 37536529 ~ 37568873 (+)
LOC110508028 neus coding downstream 433411 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 459983 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 546611 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 1060253 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 1426668 40661246 ~ 40670079 (+)
G2081371 NA non-coding upstream 5811 39225545 ~ 39228035 (+)
G2081369 NA non-coding upstream 11208 39219538 ~ 39222638 (+)
G2081139 NA non-coding upstream 233863 38997570 ~ 38999983 (+)
G2081130 NA non-coding upstream 250782 38982286 ~ 38983064 (+)
G2081129 NA non-coding upstream 252835 38980552 ~ 38981011 (+)
G2081405 NA non-coding downstream 449 39235027 ~ 39235275 (+)
G2081427 NA non-coding downstream 14567 39249145 ~ 39249364 (+)
G2081431 NA non-coding downstream 16861 39251439 ~ 39251734 (+)
G2081445 NA non-coding downstream 27972 39262550 ~ 39262760 (+)
G2081485 NA non-coding downstream 60325 39294903 ~ 39295136 (+)
G2080014 NA other upstream 1288695 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1414560 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 1865710 37366739 ~ 37368136 (+)
G2079197 NA other upstream 1953014 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 1956989 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 593080 39827658 ~ 39837383 (+)
G2081949 NA other downstream 697296 39931874 ~ 39933835 (+)
G2082162 NA other downstream 722637 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1608936 40840706 ~ 40847141 (+)

Expression


Co-expression Network