G2081371


Basic Information

Item Value
gene id G2081371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 39225545 ~ 39228035 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2379933
TAGTAAGGTAGGATATAGAGGACAGTTGTAAGGTAGGATGTAGGTTGGACAGTAGTGAGGATGGATGTAGGGAAGACAGTAGTGAGGATGGAAATAGGGTAGTCAGTAGTAAGTTAGGATTGGGGAGACAGTAGAAAGGTAGGCAGTAGGGGAGACAGTAGTGAAGATGGATATAGGGGAGACAGTAGTAAGGTAGGATACAGGGGAGACAGTAGTGAGGATGGATATAGGGGAGACAGTGGTAAGGTAGGATATAGGGGAGACAGTAGAAAGGTAGACAGTAGGGGAGACAGTAGTGAAGAAGGATATATTGGAGACAGTAGTAAGG

Function

NR:

description
LOC553259 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2379933 True 328 lncRNA 0.45 2 39225545 39228035

Neighbor

gene id symbol gene type direction distance location
LOC118944799 NA coding upstream 185920 39039573 ~ 39039625 (+)
LOC110508002 LOC106581401 coding upstream 597375 38619550 ~ 38628170 (+)
LOC110507217 NA coding upstream 750946 38469918 ~ 38474599 (+)
LOC110508017 NA coding upstream 1165432 38052633 ~ 38060113 (+)
LOC110508012 LOC106581399 coding upstream 1656672 37536529 ~ 37568873 (+)
LOC110508028 neus coding downstream 439954 39667989 ~ 39681560 (+)
LOC110507222 LOC106581437 coding downstream 466526 39694561 ~ 39701212 (+)
LOC110507223 LOC106613251 coding downstream 553154 39781189 ~ 39938079 (+)
ssr3 LOC106581450 coding downstream 1066796 40294831 ~ 40297552 (+)
LOC110508037 LOC106581457 coding downstream 1433211 40661246 ~ 40670079 (+)
G2081369 NA non-coding upstream 2907 39219538 ~ 39222638 (+)
G2081139 NA non-coding upstream 225562 38997570 ~ 38999983 (+)
G2081130 NA non-coding upstream 242481 38982286 ~ 38983064 (+)
G2081129 NA non-coding upstream 244534 38980552 ~ 38981011 (+)
G2081105 NA non-coding upstream 287422 38937365 ~ 38938123 (+)
G2081402 NA non-coding downstream 5811 39233846 ~ 39234578 (+)
G2081405 NA non-coding downstream 6992 39235027 ~ 39235275 (+)
G2081427 NA non-coding downstream 21110 39249145 ~ 39249364 (+)
G2081431 NA non-coding downstream 23404 39251439 ~ 39251734 (+)
G2081445 NA non-coding downstream 34515 39262550 ~ 39262760 (+)
G2080014 NA other upstream 1280394 37944932 ~ 37945151 (+)
G2079657 NA other upstream 1406259 37815848 ~ 37819286 (+)
G2079468 LOC106581367 other upstream 1857409 37366739 ~ 37368136 (+)
G2079197 NA other upstream 1944713 37279105 ~ 37280832 (+)
LOC110536894 NA other upstream 1948688 37031161 ~ 37276857 (+)
G2081884 LOC106581433 other downstream 599623 39827658 ~ 39837383 (+)
G2081949 NA other downstream 703839 39931874 ~ 39933835 (+)
G2082162 NA other downstream 729180 39957215 ~ 39957751 (+)
LOC110508042 LOC106613262 other downstream 1615479 40840706 ~ 40847141 (+)

Expression


Co-expression Network