Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_004038 |
| gene name | CR550307.1 |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 14693481 ~ 14695864 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0001704 | formation of primary germ layer | biological_process |
| GO:0001706 | endoderm formation | biological_process |
| GO:0001711 | endodermal cell fate commitment | biological_process |
| GO:0001714 | endodermal cell fate specification | biological_process |
| GO:0007492 | endoderm development | biological_process |
| GO:0021571 | rhombomere 5 development | biological_process |
| GO:0021572 | rhombomere 6 development | biological_process |
| GO:0198738 | cell-cell signaling by wnt | biological_process |
| GO:1903224 | regulation of endodermal cell differentiation | biological_process |
| GO:0010453 | regulation of cell fate commitment | biological_process |
| GO:0003002 | regionalization | biological_process |
| GO:0060795 | cell fate commitment involved in formation of primary germ layer | biological_process |
| GO:0035987 | endodermal cell differentiation | biological_process |
| GO:0042659 | regulation of cell fate specification | biological_process |
| GO:0042663 | regulation of endodermal cell fate specification | biological_process |
| GO:0016055 | Wnt signaling pathway | biological_process |
| ensembl_id | ENSDARG00000098277 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00007698 | True | 1279 | lncRNA | 0.37 | 2 | 14693481 | 14695864 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_004037 | adora1a | coding | downstream | 24455 | 14667066 ~ 14669026 (-) |
| XLOC_004036 | NA | coding | downstream | 261281 | 14430922 ~ 14432200 (-) |
| XLOC_004035 | NA | coding | downstream | 382244 | 14308897 ~ 14311237 (-) |
| XLOC_004034 | NA | coding | downstream | 545055 | 14147663 ~ 14148426 (-) |
| XLOC_004033 | tmem259 | coding | downstream | 591323 | 14071689 ~ 14102158 (-) |
| XLOC_004039 | NA | coding | upstream | 59041 | 14754905 ~ 14759088 (-) |
| XLOC_004040 | sgta | coding | upstream | 76044 | 14771908 ~ 14813063 (-) |
| XLOC_004041 | CU019562.1 | coding | upstream | 131510 | 14827374 ~ 14829324 (-) |
| XLOC_004042 | NA | coding | upstream | 177465 | 14873329 ~ 14874130 (-) |
| XLOC_004043 | si:dkey-6d5.1 | coding | upstream | 219916 | 14915780 ~ 14924138 (-) |
| XLOC_004019 | CR450764.8 | misc | downstream | 2001790 | 12691395 ~ 12691691 (-) |
| XLOC_004015 | CR450764.4 | misc | downstream | 2071714 | 12621518 ~ 12621767 (-) |
| XLOC_004013 | CABZ01022569.1 | misc | downstream | 2102185 | 12590999 ~ 12591296 (-) |
| XLOC_004008 | BX000700.19 | misc | downstream | 2180219 | 12512966 ~ 12513262 (-) |
| XLOC_004006 | BX000700.27 | misc | downstream | 2193219 | 12499966 ~ 12500262 (-) |
| XLOC_004063 | CR854846.1 | misc | upstream | 1431518 | 16127382 ~ 16127678 (-) |
| XLOC_004032 | CR555295.1 | non-coding | downstream | 892679 | 13798453 ~ 13800802 (-) |
| XLOC_004029 | BX530062.1 | non-coding | downstream | 1210694 | 13482671 ~ 13482787 (-) |
| XLOC_004045 | CR550302.1 | non-coding | upstream | 322274 | 15018138 ~ 15019527 (-) |
| XLOC_004048 | NA | non-coding | upstream | 615517 | 15311381 ~ 15313599 (-) |
