G2173407 (LOC105010961)


Basic Information

Item Value
gene id G2173407
gene name LOC105010961
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29752283 ~ 29752540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2484017
GGCCTGCAGGATGTCTGGGCTGACGCAGGTGTAGTTCTCCAGGAAGGCTCTGCGTGTGTCCTGCAGCTGTATGTGCTGGCCCTCCTCATGGGGAGCCTCCAGGGCCTGGAACACCACGGCCCCCAGCACTAGGTAGAGAAGCACCCCCGTCAGGATACACAGGAGGGTGGAGCAGCGCATGCTTGCACCTTCGTTAAGCCCCAAAGAAGCACGCTTCTTCCCCCCGCTGCCAGTGCTGGAGCGCTCTGGGGCCCAGCT

Function

NR:

description
PREDICTED: potassium channel subfamily K member 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2484017 True 258 lncRNA 0.64 1 29752283 29752540

Neighbor

gene id symbol gene type direction distance location
LOC110509406 NA coding upstream 11614 29739663 ~ 29740669 (+)
LOC110509974 nxf1 coding upstream 54344 29677784 ~ 29697939 (+)
LOC110509973 LOC106563482 coding upstream 77197 29666670 ~ 29675086 (+)
LOC110509970 LOC106563483 coding upstream 90047 29652518 ~ 29662236 (+)
LOC110509969 LOC106563485 coding upstream 106812 29638568 ~ 29645471 (+)
LOC118945359 LOC106590264 coding downstream 69900 29822440 ~ 29825694 (+)
cnih2 LOC106563472 coding downstream 91680 29844220 ~ 29859442 (+)
LOC110509988 tmem261 coding downstream 116551 29869091 ~ 29874237 (+)
znhit2 znhit2 coding downstream 133749 29886289 ~ 29888742 (+)
LOC110509993 slc25a45 coding downstream 162317 29914857 ~ 29925677 (+)
G2173403 NA non-coding upstream 6403 29745545 ~ 29745880 (+)
G2173401 NA non-coding upstream 8740 29743260 ~ 29743543 (+)
G2173388 NA non-coding upstream 29508 29721184 ~ 29722775 (+)
G2173364 NA non-coding upstream 100057 29652014 ~ 29652226 (+)
G2173408 NA non-coding downstream 2517 29755057 ~ 29755349 (+)
G2173417 NA non-coding downstream 12975 29765515 ~ 29766999 (+)
G2173420 NA non-coding downstream 21747 29774287 ~ 29775778 (+)
G2173422 NA non-coding downstream 30725 29783265 ~ 29783578 (+)
G2173426 NA non-coding downstream 34491 29787031 ~ 29787361 (+)
G2173114 NA other upstream 164811 29585594 ~ 29587472 (+)
G2173098 NA other upstream 192324 29559570 ~ 29559959 (+)
LOC110509373 LOC106563396 other upstream 1072606 28678848 ~ 28681351 (+)
gigyf1b LOC105024601 other upstream 1439132 28277874 ~ 28313151 (+)
G2173551 vps51 other downstream 141554 29894094 ~ 29896279 (+)
LOC110509998 LOC106563463 other downstream 199997 29952492 ~ 29956193 (+)
G2173675 NA other downstream 384183 30136723 ~ 30137320 (+)
G2173754 LOC106563449 other downstream 567108 30319648 ~ 30323615 (+)

Expression


Co-expression Network