G2173114


Basic Information

Item Value
gene id G2173114
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29585594 ~ 29587472 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2483674
ggggggggcattaaaaATGTGGCCGCGCCCCACGGTCAGACCGCGCCCCCTGCCACGCCCGTCACCCCCTAAGCCCCTTTTTCATCCAGAAAAAACCTTGCTATCACTCCATGCTTTGGCATATGACACggagtacaaggagtggaatgttagcgaATCAGACTGGTACCATTTATCTGTGCTCTATGTTCTCTGTACACTGGGCAGCACGGCCACAGGCTGGGCAGCACGGCCACAGGCTGGGCAGCACGCGGCCACAGGCTGGGCAGCACGGCCACAGGCTGGGCAgcacagagtgttttctattgaCTTGTCCAAGGACCCACAGGATGACATTTGATAACACTAACGGAGTCAAAAAGGAAACAGGGATGCGAGAAAGAAGGGAGGAGTATCATTCACTGAGGGATGAAGAGAGCCGAGCAGCAGACGAGGGTGAATCAGGCGATGGCGAGAGCAGGGCGCGTTAGTATAAATGgcaaatggttaaaaaataagtgtaaaaaaaaaatcatgaaaagGGTCATGACACATAAAATGATAGCCTTACAGAGgatagacaggacaggacacaagGTAATAGTTGACAGAATCAAGTGTGTGGTTATTTTTGCCTACCTTCTGGGGAATCTGAATGTGAGATTTCTACAacggaggggagggggaagaaaaaaaaacggtATGTACACAAACGTGCCCAAAAcaaaccacagccaatctgttaTACATGTCATGTGCATGTCAGTCAACTCAAATACATGAATACTCCCCCGGTGTCCCTCAGGAGGTGAGCTGCTTGGGCAAAACAGGTGGTCACAAAATGGCTGTTATTGTAGCCTGACATTACCATAGTATTCAGGATGTTCGGGGCAGAGCAGTTACATGAACAATGGACTCAGATTAGGATTAACATTAGCACTGGATGGGAAACATGCATGCCAATTATGATGTTATATTTACTTAGTTTTAATTCCTGGTGTTGTACAATTTATCATTAAACAATTAAACTATTGTAGGATATTCCAAATTGTATTTCAAGGTACACTCACACAGTAACTTCCCTACCTGCTTCAACTATGTGCTAACTAACCATAGCCACAGAAATATGACCTGCTTCAAACCAACTTAACCTGAAAGAGGGGAGTACTTGTAGTCAAGCGCATTGCGTGCACAAAAAACCCATCACAGGGACACACAAATGCTAATAAAACAGTCCAAAGGTCACGCTGCACAAACATGAACACCTAACTGTAATTCACTAAGCCGTTCAACACCAGGATGTGATCAGCATATCATTGGATTCAACACTAGTCATCTTCCCCATCACACATCTCAGATTCCCCCATTCGCTCACCTGCGCACAAATTTAGAAGTGAACTTTCTGAAGATACCAGTGCCCCCGGCTCTTCGGGCTTGGCTGTTCCcgtaggagagggaaggggatgaTGGGGGACCATTATAAGTGGAGGTATGTTGGTCCCGTGCCGCCCTCTGCTGGCCGGCACTGAAAGTGCTTCTGCTGGTCACATTTCTGGGGAAGTTGGAACGGTCTGTCGCCG
>TU2483675
ggggggggcattaaaaATGTGGCCGCGCCCCACGGTCAGACCGCGCCCCCTGCCACGCCCGTCACCCCCTAAGCCCCTTTTTCATCCAGAAAAAACCTTGCTATCACTCCATGCTTTGGCATATGACACggagtacaaggagtggaatgttagcgaATCAGACTGGTACCATTTATCTGTGCTCTATGTTCTCTGTACACTGGGCAGCACGGCCACAGGCTGGGCAGCACGGCCACAGGCTGGGCAgcacagagtgttttctattgaCTTGTCCAAGGACCCACAGGATGACATTTGATAACACTAACGGAGTCAAAAAGGAAACAGGGATGCGAGAAAGAAGGGAGGAGTATCATTCACTGAGGGATGAAGAGAGCCGAGCAGCAGACGAGGGTGAATCAGGCGATGGCGAGAGCAGGGCGCGTTAGTATAAATGgcaaatggttaaaaaataagtgtaaaaaaaaaatcatgaaaagGGTCATGACACATAAAATGATAGCCTTACAGAGgatagacaggacaggacacaagGTAATAGTTGACAGAATCAAGTGTGTGGTTATTTTTGCCTACCTTCTGGGGAATCTGAATGTGAGATTTCTACAacggaggggagggggaagaaaaaaaaacggtATGTACACAAACGTGCCCAAAAcaaaccacagccaatctgttaTACATGTCATGTGCATGTCAGTCAACTCAAATACATGAATACTCCCCCGGTGTCCCTCAGGAGGTGAGCTGCTTGGGCAAAACAGGTGGTCACAAAATGGCTGTTATTGTAGCCTGACATTACCATAGTATTCAGGATGTTCGGGGCAGAGCAGTTACATGAACAATGGACTCAGATTAGGATTAACATTAGCACTGGATGGGAAACATGCATGCCAATTATGATGTTATATTTACTTAGTTTTAATTCCTGGTGTTGTACAATTTATCATTAAACAATTAAACTATTGTAGGATATTCCAAATTGTATTTCAAGGTACACTCACACAGTAACTTCCCTACCTGCTTCAACTATGTGCTAACTAACCATAGCCACAGAAATATGACCTGCTTCAAACCAACTTAACCTGAAAGAGGGGAGTACTTGTAGTCAAGCGCATTGCGTGCACAAAAAACCCATCACAGGGACACACAAATGCTAATAAAACAGTCCAAAGGTCACGCTGCACAAACATGAACACCTAACTGTAATTCACTAAGCCGTTCAACACCAGGATGTGATCAGCATATCATTGGATTCAACACTAGTCATCTTCCCCATCACACATCTCAGATTCCCCCATTCGCTCACCTGCGCACAAATTTAGAAGTGAACTTTCTGAAGATACCAGTGCCCCCGGCTCTTCGGGCTTGGCTGTTCCcgtaggagagggaaggggatgaTGGGGGACCATTATAAGTGGAGGTATGTTGGTCCCGTGCCGCCCTCTGCTGGCCGGCACTGAAAGTGCTTCTGCTGGTCACATTTCTGGGGAAGTTGGAACGGTCTGTCGCCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2483674 False 1559 TUCP 0.47 2 29585594 29587472
TU2483675 True 1517 lncRNA 0.46 2 29585594 29587472

Neighbor

gene id symbol gene type direction distance location
LOC110509964 LOC106563493 coding upstream 12150 29570335 ~ 29573444 (+)
LOC118945365 NA coding upstream 88309 29487508 ~ 29497285 (+)
LOC110509962 LOC106603154 coding upstream 148532 29433858 ~ 29437062 (+)
LOC110509959 LOC106563498 coding upstream 157726 29325241 ~ 29427868 (+)
LOC110509958 LOC102778633 coding upstream 265939 29314791 ~ 29319655 (+)
LOC110509967 LOC106563487 coding downstream 23255 29610727 ~ 29624280 (+)
LOC110509968 LOC106563486 coding downstream 45919 29633391 ~ 29637493 (+)
LOC110509969 LOC106563485 coding downstream 51096 29638568 ~ 29645471 (+)
LOC110509970 LOC106563483 coding downstream 65046 29652518 ~ 29662236 (+)
LOC110509973 LOC106563482 coding downstream 79198 29666670 ~ 29675086 (+)
G2173113 NA non-coding upstream 3870 29580614 ~ 29581724 (+)
G2173106 NA non-coding upstream 9839 29575253 ~ 29575755 (+)
G2173104 NA non-coding upstream 17131 29568140 ~ 29568463 (+)
G2173103 LOC100380853 non-coding upstream 18140 29567236 ~ 29567454 (+)
G2173102 NA non-coding upstream 19581 29565800 ~ 29566013 (+)
G2173117 NA non-coding downstream 4491 29591963 ~ 29594291 (+)
G2173120 NA non-coding downstream 19275 29606747 ~ 29607845 (+)
G2173109 NA non-coding downstream 39087 29626559 ~ 29632232 (+)
G2173363 NA non-coding downstream 63858 29651330 ~ 29651986 (+)
G2173098 NA other upstream 25635 29559570 ~ 29559959 (+)
LOC110509373 LOC106563396 other upstream 905917 28678848 ~ 28681351 (+)
gigyf1b LOC105024601 other upstream 1272443 28277874 ~ 28313151 (+)
G2170458 LOC106563185 other upstream 2260829 27322105 ~ 27324765 (+)
LOC110509877 LOC106563217 other upstream 3052814 26504919 ~ 26532797 (+)
LOC110509988 tmem261 other downstream 281666 29869091 ~ 29874237 (+)
G2173551 vps51 other downstream 306622 29894094 ~ 29896279 (+)
LOC110509998 LOC106563463 other downstream 365065 29952492 ~ 29956193 (+)
G2173675 NA other downstream 549251 30136723 ~ 30137320 (+)

Expression


Co-expression Network