G2173102


Basic Information

Item Value
gene id G2173102
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29565800 ~ 29566013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2483642
cataaagcaaaatctacaatggaatggttaaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacttgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcgaggaatgggaaaaaatgtcagtctctcgatgtgcaaaactgatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2483642 True 214 lncRNA 0.40 1 29565800 29566013

Neighbor

gene id symbol gene type direction distance location
LOC118945365 NA coding upstream 68515 29487508 ~ 29497285 (+)
LOC110509962 LOC106603154 coding upstream 128738 29433858 ~ 29437062 (+)
LOC110509959 LOC106563498 coding upstream 137932 29325241 ~ 29427868 (+)
LOC110509958 LOC102778633 coding upstream 246145 29314791 ~ 29319655 (+)
LOC110509955 slc3a2 coding upstream 252567 29308144 ~ 29313233 (+)
LOC110509964 LOC106563493 coding downstream 4322 29570335 ~ 29573444 (+)
LOC110509967 LOC106563487 coding downstream 44714 29610727 ~ 29624280 (+)
LOC110509968 LOC106563486 coding downstream 67378 29633391 ~ 29637493 (+)
LOC110509969 LOC106563485 coding downstream 72555 29638568 ~ 29645471 (+)
LOC110509970 LOC106563483 coding downstream 86505 29652518 ~ 29662236 (+)
G2173097 NA non-coding upstream 7844 29557741 ~ 29557956 (+)
G2173095 NA non-coding upstream 8644 29556786 ~ 29557156 (+)
G2173093 NA non-coding upstream 9915 29555671 ~ 29555885 (+)
G2173067 NA non-coding upstream 56135 29507889 ~ 29509665 (+)
G2173049 NA non-coding upstream 96025 29469277 ~ 29469775 (+)
G2173103 LOC100380853 non-coding downstream 1223 29567236 ~ 29567454 (+)
G2173104 NA non-coding downstream 2127 29568140 ~ 29568463 (+)
G2173106 NA non-coding downstream 9240 29575253 ~ 29575755 (+)
G2173113 NA non-coding downstream 14601 29580614 ~ 29581724 (+)
G2173114 NA non-coding downstream 19581 29585594 ~ 29587472 (+)
G2173098 NA other upstream 5841 29559570 ~ 29559959 (+)
LOC110509373 LOC106563396 other upstream 886123 28678848 ~ 28681351 (+)
gigyf1b LOC105024601 other upstream 1252649 28277874 ~ 28313151 (+)
G2170458 LOC106563185 other upstream 2241035 27322105 ~ 27324765 (+)
LOC110509877 LOC106563217 other upstream 3033020 26504919 ~ 26532797 (+)
LOC110509988 tmem261 other downstream 303125 29869091 ~ 29874237 (+)
G2173551 vps51 other downstream 328081 29894094 ~ 29896279 (+)
LOC110509998 LOC106563463 other downstream 386524 29952492 ~ 29956193 (+)

Expression


Co-expression Network