G2173049


Basic Information

Item Value
gene id G2173049
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29469277 ~ 29469775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2483584
cccctgatattgtaatattgagaggttagcatgtcttggggtatgatataaaattctaacctcccctgttattgtaatattgggaggttagcatgtcttggggtatgatataaaatgctaacctcccctgttattgtaatattgagaggttagcatgtcttggggtatgatataaaatgctaacctcccctgttaattgtaatattgagaggttagcatgtcttggggtatgatataaaatgctaacctcccctgttattgtaatattgagaggttagcatgtcatggggttatgatataaaatgctaacct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2483584 True 312 lncRNA 0.37 2 29469277 29469775

Neighbor

gene id symbol gene type direction distance location
LOC110509962 LOC106603154 coding upstream 32215 29433858 ~ 29437062 (+)
LOC110509959 LOC106563498 coding upstream 41409 29325241 ~ 29427868 (+)
LOC110509958 LOC102778633 coding upstream 149622 29314791 ~ 29319655 (+)
LOC110509955 slc3a2 coding upstream 156044 29308144 ~ 29313233 (+)
LOC110509954 LOC106563504 coding upstream 170678 29290968 ~ 29298599 (+)
LOC118945365 NA coding downstream 17733 29487508 ~ 29497285 (+)
LOC110509964 LOC106563493 coding downstream 100560 29570335 ~ 29573444 (+)
LOC110509967 LOC106563487 coding downstream 140952 29610727 ~ 29624280 (+)
LOC110509968 LOC106563486 coding downstream 163616 29633391 ~ 29637493 (+)
LOC110509969 LOC106563485 coding downstream 168793 29638568 ~ 29645471 (+)
G2173006 LOC106563499 non-coding upstream 74981 29391110 ~ 29394296 (+)
G2173004 NA non-coding upstream 79624 29389004 ~ 29389653 (+)
G2172962 NA non-coding upstream 145046 29324016 ~ 29324231 (+)
G2172953 NA non-coding upstream 168793 29299973 ~ 29300484 (+)
G2172940 NA non-coding upstream 199089 29269807 ~ 29270188 (+)
G2173067 NA non-coding downstream 38114 29507889 ~ 29509665 (+)
G2173093 NA non-coding downstream 85896 29555671 ~ 29555885 (+)
G2173095 NA non-coding downstream 87011 29556786 ~ 29557156 (+)
G2173097 NA non-coding downstream 87966 29557741 ~ 29557956 (+)
G2173102 NA non-coding downstream 96025 29565800 ~ 29566013 (+)
LOC110509373 LOC106563396 other upstream 789600 28678848 ~ 28681351 (+)
gigyf1b LOC105024601 other upstream 1156126 28277874 ~ 28313151 (+)
G2170458 LOC106563185 other upstream 2144512 27322105 ~ 27324765 (+)
LOC110509877 LOC106563217 other upstream 2936497 26504919 ~ 26532797 (+)
LOC110509876 LOC106563358 other upstream 3004716 26463263 ~ 26464615 (+)
G2173098 NA other downstream 89795 29559570 ~ 29559959 (+)
G2173114 NA other downstream 115819 29585594 ~ 29587472 (+)
LOC110509970 LOC106563483 other downstream 182794 29652518 ~ 29662236 (+)
LOC110509988 tmem261 other downstream 399363 29869091 ~ 29874237 (+)
G2173551 vps51 other downstream 424319 29894094 ~ 29896279 (+)

Expression


Co-expression Network