G2173004


Basic Information

Item Value
gene id G2173004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29389004 ~ 29389653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2483539
CTCTGCTTTGCTCCCCTCCACCATAGCACCCCACACCCACTCCTCCCGAAACTGCCTCTCTATGCAGTTTAGTGATAAGACATTTTGTAGGACCAAGGTAGAAGATAAACAAGGATTTTAATGCTGTATGCAGCAATCTGTTAATGACCACTTAAACATGCATGTACATGAGTCATTTGCATGAATAATACTCAACCCCCTCCAACGctcattctctccctcattctctccctcacgctctccctcattctctccctcacgctctccctcactctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2483539 True 278 lncRNA 0.47 2 29389004 29389653

Neighbor

gene id symbol gene type direction distance location
LOC110509958 LOC102778633 coding upstream 69349 29314791 ~ 29319655 (+)
LOC110509955 slc3a2 coding upstream 75771 29308144 ~ 29313233 (+)
LOC110509954 LOC106563504 coding upstream 90405 29290968 ~ 29298599 (+)
LOC110509956 LOC106563505 coding upstream 98244 29286398 ~ 29290760 (+)
LOC110509953 dipa coding upstream 108119 29279348 ~ 29280885 (+)
LOC110509962 LOC106603154 coding downstream 44205 29433858 ~ 29437062 (+)
LOC118945365 NA coding downstream 97855 29487508 ~ 29497285 (+)
LOC110509964 LOC106563493 coding downstream 180682 29570335 ~ 29573444 (+)
LOC110509967 LOC106563487 coding downstream 221074 29610727 ~ 29624280 (+)
LOC110509968 LOC106563486 coding downstream 243738 29633391 ~ 29637493 (+)
G2172962 NA non-coding upstream 64773 29324016 ~ 29324231 (+)
G2172953 NA non-coding upstream 88520 29299973 ~ 29300484 (+)
G2172940 NA non-coding upstream 118816 29269807 ~ 29270188 (+)
G2172923 NA non-coding upstream 150464 29237670 ~ 29238540 (+)
G2172897 NA non-coding upstream 151936 29236788 ~ 29237068 (+)
G2173006 LOC106563499 non-coding downstream 1457 29391110 ~ 29394296 (+)
G2173049 NA non-coding downstream 79624 29469277 ~ 29469775 (+)
G2173067 NA non-coding downstream 118236 29507889 ~ 29509665 (+)
G2173093 NA non-coding downstream 166018 29555671 ~ 29555885 (+)
G2173095 NA non-coding downstream 167133 29556786 ~ 29557156 (+)
LOC110509373 LOC106563396 other upstream 709327 28678848 ~ 28681351 (+)
gigyf1b LOC105024601 other upstream 1075853 28277874 ~ 28313151 (+)
G2170458 LOC106563185 other upstream 2064239 27322105 ~ 27324765 (+)
LOC110509877 LOC106563217 other upstream 2856224 26504919 ~ 26532797 (+)
LOC110509876 LOC106563358 other upstream 2924443 26463263 ~ 26464615 (+)
G2173098 NA other downstream 169917 29559570 ~ 29559959 (+)
G2173114 NA other downstream 195941 29585594 ~ 29587472 (+)
LOC110509970 LOC106563483 other downstream 262916 29652518 ~ 29662236 (+)
LOC110509988 tmem261 other downstream 479485 29869091 ~ 29874237 (+)
G2173551 vps51 other downstream 504441 29894094 ~ 29896279 (+)

Expression


Co-expression Network