G2172940


Basic Information

Item Value
gene id G2172940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29269807 ~ 29270188 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2483455
CTCCAACTCTATGTGCATTTCTTAGTCTCTATACACATTAGTAATAGCAATTATCAGTTAGTTGCTCACTTTGAAGTTAACCTCCATCAACTTGTAGACTTTGATCTTTCCCCGCAGAGCAGCACACACCAGGATTTTATGTTGGTCCATCATGTCTTTGTCATTAACCAAAACCTTGAGATCTTTCAGTTCATTCAGAAACTCTTTCTCCAGGTCAACATCCATATCCTCCATCATGCTATctgtgaag

Function

NR:

description
acidic fibroblast growth factor intracellular-binding protein B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2483455 True 250 lncRNA 0.39 2 29269807 29270188

Neighbor

gene id symbol gene type direction distance location
LOC110509944 LOC106603168 coding upstream 96228 29129862 ~ 29173579 (+)
cmc4 cmc4 coding upstream 170723 29098274 ~ 29099084 (+)
gabra3 LOC106563399 coding upstream 294320 28834579 ~ 28975487 (+)
LOC110509373 LOC106563396 coding upstream 588456 28678848 ~ 28681351 (+)
LOC118945687 NA coding upstream 638275 28631455 ~ 28631532 (+)
LOC110509953 dipa coding downstream 9160 29279348 ~ 29280885 (+)
LOC110509956 LOC106563505 coding downstream 16210 29286398 ~ 29290760 (+)
LOC110509954 LOC106563504 coding downstream 20780 29290968 ~ 29298599 (+)
LOC110509955 slc3a2 coding downstream 37956 29308144 ~ 29313233 (+)
LOC110509958 LOC102778633 coding downstream 44603 29314791 ~ 29319655 (+)
G2172923 NA non-coding upstream 31267 29237670 ~ 29238540 (+)
G2172897 NA non-coding upstream 32739 29236788 ~ 29237068 (+)
G2172765 NA non-coding upstream 164325 29104947 ~ 29105482 (+)
G2172432 NA non-coding upstream 290762 28959987 ~ 28979045 (+)
G2172953 NA non-coding downstream 29785 29299973 ~ 29300484 (+)
G2172962 NA non-coding downstream 53828 29324016 ~ 29324231 (+)
G2173004 NA non-coding downstream 118816 29389004 ~ 29389653 (+)
G2173006 LOC106563499 non-coding downstream 120922 29391110 ~ 29394296 (+)
G2173049 NA non-coding downstream 199089 29469277 ~ 29469775 (+)
gigyf1b LOC105024601 other upstream 956656 28277874 ~ 28313151 (+)
G2170458 LOC106563185 other upstream 1945042 27322105 ~ 27324765 (+)
LOC110509877 LOC106563217 other upstream 2737027 26504919 ~ 26532797 (+)
LOC110509876 LOC106563358 other upstream 2805246 26463263 ~ 26464615 (+)
G2173098 NA other downstream 289382 29559570 ~ 29559959 (+)
G2173114 NA other downstream 315406 29585594 ~ 29587472 (+)
LOC110509970 LOC106563483 other downstream 382381 29652518 ~ 29662236 (+)
LOC110509988 tmem261 other downstream 598950 29869091 ~ 29874237 (+)
G2173551 vps51 other downstream 623906 29894094 ~ 29896279 (+)

Expression


Co-expression Network