G2173113


Basic Information

Item Value
gene id G2173113
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29580614 ~ 29581724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2483673
gaagttaacatacactcaattagtatttggtagcattgcctttaaattaatgtttcaggtagccttccacaagcttcccacaataagttgggtgaattttgtcccattcctcctggcaaagctggtgtaacagagtcaggtctgtaggcctccttgctcgcacacgctttttcagttctgcccacacattttctatagaattgaggtaagggctttgtgatggccactccaataccttgactttgtccttaagccagtttgccacaactatgaaagtatgcttggggtcattgtccatttggaagacccatttgcaacaaagcgttaacttcctgactgatgtgttgagatgttgcttaaatatatccacaaaattgtccttcctcataatgccatctattttgtgaagtgcaccagtccctcctgcagcaaagcacccccaaaacatgatgctgccacccccgtgcttcacggttgggatggtgttcttcggcttgcaagcctcccccttttttctctccaaacataatgatggtcattatggccaaacagttctatttttgtttcatcaggccagaggacatttctccaaaaaatatgatctttgtccccatgtgcagttgcaaactgtagcctggcttttttatggtggttttggagcagtggcttcttccttgctgagtggcctttcaggtcatgttgatataggactcgttttactgtggatatagatacttttgtacccgtttcctccagcatcttcacaaggtccttcgctgttgttctgagattgatttacatttttctcaccaaagtatgttagtctctaggagacagaacgcatctccttcctgagcggtatgacggctgtggtctcatggtgtttatacttgcgtactattgtttgaacagatgaacgtggtaccttcaggcgtttggaaattgatcccaaggatgaaccagacttgtggaggtctaccatttttttcctgaggtctttgtggatttccccatgatgtcaagcaaagaggcactgaggttgaaggtaggccttgaaatacgtccACAGGAACCCCTCCAAttgacgtcaattagcctatcagaagtttct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2483673 True 1111 lncRNA 0.44 1 29580614 29581724

Neighbor

gene id symbol gene type direction distance location
LOC110509964 LOC106563493 coding upstream 7170 29570335 ~ 29573444 (+)
LOC118945365 NA coding upstream 83329 29487508 ~ 29497285 (+)
LOC110509962 LOC106603154 coding upstream 143552 29433858 ~ 29437062 (+)
LOC110509959 LOC106563498 coding upstream 152746 29325241 ~ 29427868 (+)
LOC110509958 LOC102778633 coding upstream 260959 29314791 ~ 29319655 (+)
LOC110509967 LOC106563487 coding downstream 29003 29610727 ~ 29624280 (+)
LOC110509968 LOC106563486 coding downstream 51667 29633391 ~ 29637493 (+)
LOC110509969 LOC106563485 coding downstream 56844 29638568 ~ 29645471 (+)
LOC110509970 LOC106563483 coding downstream 70794 29652518 ~ 29662236 (+)
LOC110509973 LOC106563482 coding downstream 84946 29666670 ~ 29675086 (+)
G2173106 NA non-coding upstream 4859 29575253 ~ 29575755 (+)
G2173104 NA non-coding upstream 12151 29568140 ~ 29568463 (+)
G2173103 LOC100380853 non-coding upstream 13160 29567236 ~ 29567454 (+)
G2173102 NA non-coding upstream 14601 29565800 ~ 29566013 (+)
G2173097 NA non-coding upstream 22658 29557741 ~ 29557956 (+)
G2173114 NA non-coding downstream 3870 29585594 ~ 29587472 (+)
G2173117 NA non-coding downstream 10239 29591963 ~ 29594291 (+)
G2173120 NA non-coding downstream 25023 29606747 ~ 29607845 (+)
G2173109 NA non-coding downstream 44835 29626559 ~ 29632232 (+)
G2173098 NA other upstream 20655 29559570 ~ 29559959 (+)
LOC110509373 LOC106563396 other upstream 900937 28678848 ~ 28681351 (+)
gigyf1b LOC105024601 other upstream 1267463 28277874 ~ 28313151 (+)
G2170458 LOC106563185 other upstream 2255849 27322105 ~ 27324765 (+)
LOC110509877 LOC106563217 other upstream 3047834 26504919 ~ 26532797 (+)
LOC110509988 tmem261 other downstream 287414 29869091 ~ 29874237 (+)
G2173551 vps51 other downstream 312370 29894094 ~ 29896279 (+)
LOC110509998 LOC106563463 other downstream 370813 29952492 ~ 29956193 (+)

Expression


Co-expression Network