G2173555


Basic Information

Item Value
gene id G2173555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29836141 ~ 29836501 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2484180
GGCCTTAAGATTATTCTTATCTAACATGTCTTGTGAATGTACAGTTGTAGGAAATTTAAGTCCTGAATATGAGCtaacacattcacacagacaaacatcatACGCAGTACTCACCTTCAGATGCAGCCGAGCCTGGCCCGGTGACTTTCATAGCACGAGGCCAAAGGTTAGGGAGCGTCAGCTTTTGGGGGGGTGCAAGGACAGAAAGGCAGAAATAAGGAAAGAGCGGTCTAATGTAGCAGAAAAGTCTGATAGAAGGCAAAACAGTGATGAACATATACACAGACAGCCTCACTAAGAGGAGAGGTAGAAAGGATAAGGAGTTTAGGGTGCATTTGTCAGCAATGCAATGGCAGAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2484180 True 361 lncRNA 0.45 1 29836141 29836501

Neighbor

gene id symbol gene type direction distance location
LOC118945359 LOC106590264 coding upstream 10447 29822440 ~ 29825694 (+)
LOC110509406 NA coding upstream 95472 29739663 ~ 29740669 (+)
LOC110509974 nxf1 coding upstream 138202 29677784 ~ 29697939 (+)
LOC110509973 LOC106563482 coding upstream 161055 29666670 ~ 29675086 (+)
LOC110509970 LOC106563483 coding upstream 173905 29652518 ~ 29662236 (+)
cnih2 LOC106563472 coding downstream 7719 29844220 ~ 29859442 (+)
LOC110509988 tmem261 coding downstream 32590 29869091 ~ 29874237 (+)
znhit2 znhit2 coding downstream 49788 29886289 ~ 29888742 (+)
LOC110509993 slc25a45 coding downstream 78356 29914857 ~ 29925677 (+)
LOC110509996 LOC106563468 coding downstream 103806 29940307 ~ 29940985 (+)
G2173554 NA non-coding upstream 59 29831894 ~ 29836082 (+)
G2173548 NA non-coding upstream 7090 29828811 ~ 29829051 (+)
G2173546 NA non-coding upstream 8136 29827772 ~ 29828005 (+)
G2173428 NA non-coding upstream 47390 29788453 ~ 29788751 (+)
G2173558 NA non-coding downstream 2605 29839106 ~ 29839371 (+)
G2173570 NA non-coding downstream 41274 29877775 ~ 29878698 (+)
G2173580 NA non-coding downstream 42707 29879208 ~ 29879475 (+)
G2173581 NA non-coding downstream 43451 29879952 ~ 29880235 (+)
G2173114 NA other upstream 248669 29585594 ~ 29587472 (+)
G2173098 NA other upstream 276182 29559570 ~ 29559959 (+)
LOC110509373 LOC106563396 other upstream 1156464 28678848 ~ 28681351 (+)
gigyf1b LOC105024601 other upstream 1522990 28277874 ~ 28313151 (+)
G2173551 vps51 other downstream 57593 29894094 ~ 29896279 (+)
LOC110509998 LOC106563463 other downstream 116036 29952492 ~ 29956193 (+)
G2173675 NA other downstream 300222 30136723 ~ 30137320 (+)
G2173754 LOC106563449 other downstream 483147 30319648 ~ 30323615 (+)

Expression


Co-expression Network