XLOC_004481 (si:dkey-94f20.4)


Basic Information

Item Value
gene id XLOC_004481
gene name si:dkey-94f20.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 4573696 ~ 4576816 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008961
GGTGAGAAGGTGAAGGAGAGACTGACCCCAGTGCTGAACTTGCTGGCCGAATGCTCCAGAGCTCACAGAGACACCAGACTCTACCTCAGACAACAGATTTTGCCTCCGCTAAAAGACGCCAGCACTAAACCTGAGAAGGGAAGCACCATGAGGAATCGTCTGGTCAGACTGATGACCCATCTGGACACGGAGCTCAAACACTGCGCTGCTGATCTGCTCTTTGTGCTGTGCAAAGAGAACGTGAGGCGTTTCGTCAAGTACACTGGATACGGAAATGCCGCCGGGCTTCTGGCCACAAGAGGTCTGCTCGGAGGTCAAAGGTCATCAGCCTCTTCATCAGGCACACGTTACTCCAGCGATTCAGACTCGGACACGGAGGAGTACCGGCAGATTAAAGACAAGGTGAACCCAGTGACGGGACAGGTGGAGGAGGAGCAGCACAACCCCATGGAGGGAATGACggaggaggagaaagaggaggaggcGCACCGGCTCATCAGCCTCTTCAGCAAACTCTCCAAGGATAATGTGATTCAGCCGATGGGACTGAATAAAGAGGGTCTGCTGGTGCCGCTGTCCGAGCTCAGAGATCTGTCCATGGAGGAGAAAGAATCAGAAGAGGATCCGGACGACCTGGAGAACGTGGAGTAG

Function

symbol description
si:dkey-94f20.4 Predicted to be located in cytoplasm.

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-121214-276 Predicted to be located in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000016923

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008961 True 651 mRNA 0.55 4 4573696 4576816

Neighbor

gene id symbol gene type direction distance location
XLOC_004480 CABZ01030103.1 coding upstream 76217 4497364 ~ 4497479 (+)
XLOC_004479 NA coding upstream 100548 4428123 ~ 4473148 (+)
XLOC_004478 NA coding upstream 123244 4408659 ~ 4450452 (+)
XLOC_004477 mmp25b coding upstream 295367 4260779 ~ 4278329 (+)
XLOC_004476 mapk7 coding upstream 334869 4220353 ~ 4238827 (+)
XLOC_004482 kansl1a coding downstream 109329 4686145 ~ 4725660 (+)
XLOC_004483 NA coding downstream 152201 4729017 ~ 4734988 (+)
XLOC_004484 NA coding downstream 171755 4748571 ~ 4751852 (+)
XLOC_004485 NA coding downstream 258033 4834849 ~ 4835314 (+)
XLOC_004486 ghrhr2 coding downstream 268632 4845448 ~ 4854555 (+)
XLOC_004472 NA non-coding upstream 467286 4103788 ~ 4106410 (+)
XLOC_004471 NA non-coding upstream 480123 4092452 ~ 4093573 (+)
XLOC_004492 AL929469.5 non-coding downstream 474746 5051562 ~ 5051697 (+)
XLOC_004493 AL929469.4 non-coding downstream 475627 5052443 ~ 5052578 (+)

Expression


Co-expression Network