LOC120558573


Basic Information

Item Value
gene id LOC120558573
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14056622 ~ 14059897 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799618.1
CACTTCCATGATTGCCTTCTGTTCAAGTTGTGTGACTCTGTTTTTATTCTAACACCAATGCCTCTCTGATATGGAGTCCTGCCTTCCTCTGGTTACAAGTAGTGGGGGAGGGGGCAGAAGACAGGCAGGATATGAACAGACTAgaaataactgtgtgtgtgtgtgtatgtgtgtgtgcgcgcatctGCGtgtaaaaatgagaaaaaaagtcaaatctgGAGTATGAAGCGGAGATGTGTATGTGGAGGAGAGGGTAGAGGTTCCCGAGCATGACTTTTAAGGGAGAGGGCTTTCAGGAAGGAGATAAGAGAAGTCTGCTTCCGGACCACTAACATTCCTTTACCAAAAAAAGAGGGCCTACCTAAACTGTGTGGCTTATACCTATACTATagatatgtgtgtttatgtgtaggcTAGCCTATACATTGGTGTCTTTAGTTCAATTGGTCAGGGGGCTGGCTTTCAGGCTGAATCAGTTTGAGTTTATCAGGGTCATGAGTATCAGTCATCCTCCACTGGCAGAAGAGAAACATCTTGTTTGCTACAAGACCCAGGCTActgaaaataatgtttttctcCGACATATTTTTGGTTGTTTCTTTGCTGACCTTTCTGCGGGACTTCCATGTGTCCAGTTGTGATCCCAACTGTACAGATAAACCTGAGTTCACTCCAACCAGTCTGGTAGTGAAGTATGGTGACCCAACCTCTGCCAGCTGCTCTGTATGTCAGCATGCTTGCCTCGGCGACGGCACCATTTATAATGTGGAGAGCCCTGTTGGAAACTCAGCAAAAAACGGAACCACAATTTCATGGACGATTGACAGACTGACTGAATGGCAAACATCTCCCATGTGCTATTATACCAGCAATACTGGTTACCAGTGTTGTAGCATCCTGCCTGTAACTGTGTACCAGCCTCCAGACAGTGTGTCCATCAGCTTTGTAAATCACACTGTGCCGATGTCTGAGGGTCATCAGTACACTCTGCAGTGTACAGTAAAGGACGTTGCTCCTGTTGAAAAGCTCGTTGTGATGTTCTACAGAGGACAGACAGCGCTGGGTCAACCTCAGTCCAACAACAACATAGAGAAGAAACCAGTGACTGAGAGCTTCTCTTTAAACATCACACCCAGTAAAGATGATGATGGAGGCCAGTACTGGTGTGAAGCAAAGCTAGAACTGGGACCTGATGGACCACAGCGCCCTCCAGTGGTGATGTCAGAAAACATCACTGCCACTGTGTACTATAAGCCTCAACTAAAGTCATCACATTCAAATATCACCGTCGCAGAAGGAAACTCTCTACAACTGAACTGCTCGACTGTGGGAAACCCCAGCCCCATGTACACGTGGACATCACCTATCCGTTCCTACCCCAATGGCAGCGTTCTCACTATCGACTCTGTAACGTCTGAGGATAAAGGGCAGTACACCTGTTCTGTCAGCAACCGCATGGGGACTGTCACTGTGACGTTTAATGTGGATGTCAAAGTAAGCTACTTGGGACTCATTATAGGTGTGATTGCAGCAGTTGCTGTTCTGGTTGTCATCTGTGTAATAAGTGGATACTCATTTTTCTACAAATCCAGTCGGATCAGGACAATCTGAAGGACGTTTTCTGTTTGCACACAAGACACTCTGCCGTGCATTCTGTAGAGTAAGCCTGCAGTACGGCATGAAATATGTATGGGCTGGTTGCATCTAGCTCTCCCTCATTTCCTGTCATGTCTGTACTGACGCTATctaatgacataaaatgccacAAATCATAAAAAAGGAGTTTAAGTCAAGTTTCAACTTCAACTTCAACTAAACTGAATGGAACAAGTCACTAGCTCTCTGAGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799618.1 True 1851 mRNA 0.46 5 14056622 14059897

Neighbor

gene id symbol gene type direction distance location
cdc37 LOC103374849 coding downstream 4870 14044322 ~ 14051752 (-)
LOC120567316 NA coding downstream 72992 13959135 ~ 13983630 (-)
LOC120558259 NA coding downstream 97651 13948209 ~ 13958971 (-)
LOC120567288 LOC103136441,LOC106959223 coding downstream 120934 13901386 ~ 13935688 (-)
LOC120558291 NA coding downstream 187836 13853636 ~ 13868786 (-)
LOC120558590 NA coding upstream 33388 14093285 ~ 14095869 (-)
LOC120558598 NA coding upstream 67568 14127465 ~ 14132932 (-)
LOC120558610 NA coding upstream 81418 14141315 ~ 14146842 (-)
LOC120567413 LOC104965219 coding upstream 90432 14150329 ~ 14179046 (-)
LOC120557653 LOC103366227,LOC103383461 coding upstream 121253 14181150 ~ 14203254 (-)
G4359 NA non-coding downstream 165 14055443 ~ 14056457 (-)
G4354 NA non-coding downstream 10903 14045360 ~ 14045719 (-)
LOC120558530 NA non-coding downstream 288766 13765193 ~ 13767856 (-)
LOC120558524 NA non-coding downstream 520374 13520001 ~ 13536248 (-)
G4115 LOC101079010,LOC105939483,LOC106946826,LOC103153258,LOC106910155 non-coding downstream 564625 13487920 ~ 13491997 (-)
LOC120558581 NA non-coding upstream 7951 14067848 ~ 14071547 (-)
LOC120558586 NA non-coding upstream 18420 14078317 ~ 14078999 (-)
LOC120558606 NA non-coding upstream 46054 14105951 ~ 14108693 (-)
G4443 NA non-coding upstream 237192 14297089 ~ 14297452 (-)
G4450 NA non-coding upstream 379559 14439456 ~ 14439663 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 14112 14018902 ~ 14042510 (-)
G4168 NA other downstream 489356 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 1016342 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 1028229 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 1190583 12865968 ~ 12866039 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 652247 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 841249 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 1366647 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 2285821 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 3352156 17412053 ~ 17421098 (-)

Expression


Co-expression Network