LOC120558598


Basic Information

Item Value
gene id LOC120558598
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14127465 ~ 14132932 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799654.1
ACTGGCAGGTCTACCGGAATTTCCCCAAAATGCTTCGGAAATCCTCCCTGATAGTTTCAATTTcacttgtcatttttttatgacgTGACGCTCTCTCTTCGGGGGAAAATAATAAGGGAGTGGACTTTTACTTTCAATATCATTCGCACTCTTTTGACTTTGGGCTCAGCCGTCTGCTTACAAGACCCAGGCTAcctaaaataatgtttttctcCGACATATTTTTGGTTGTTTCTTTGCTGACCTTTCTGCGGGACTTCCATGTGTCCAGTTGTGATCAAAACTGTACAGATAAACCTGAGTTCACTCCAACCAGTCTGGTAGTGAAGTATGGTGACCCAACCTCTGCCATCTGCTCTGTATGTCAGCATGCTTGCCTCGGCGACGGCACCATTTATAATGTGGAGAGCCCTGTTGGAAACTCAACAAAAAACGGAACCACAATTTTATGGACGGTTGACAGACTGACTGAATGGCAAACATCTCCCATGTGCTATTATACCAGCAATACTGGTTACCAGTGTTGTAGCACCCTGACTGTAACTGTGTACCAGCCTCCAGACAGTGTGTCCATCAGCTTTGTAAATCACACTGGGCCGATGTCTGAGGGTCATCAGTACACTCTGCAGTGTACAGTAAAGGACGTTGCTCCTGTTGAAAAGCTCGTTGTGATGTTCTACAGAGGACAGACATCGCTGGGTCAACCTCAGTCCAACAACAACATAGAGAAGAAACCAGTGAATGAGAGCTTCTCTTTAAACATCACACCCAGTAAAGATGATGATGGAGTCCAGTTCTGGTGTGAAGCAAAGCTAGAACTGGGACCTGATGGACCACAGCGCCCTCCAGTGGTGACGTCAGAAAACATCACTGCCACTGTGTACTATAAGCCTCAACTAAATTCATCACATTTAAATATCACCGTCGCAGAAGGAAACTCTCTACAACTGAACTGCTCGACTGTGGGAAACCCCAGCCCCATGTACACGTGGACATCACCTATCCGTTATTACCCCAGTGGCAGCGTTCTCACTATCGACTCTGTAACGTCTGAGGATAAAGGGCAGTACACCTGTTCTGTCAGCAACCGCATGGGGACTGTCACTGTGACGTTTAATGTGGATGTCAAAGTAAGCTACTTGGGACTCATTATAGGTGTGATTGCAGCAGTTGCTGTTCTGGTTGTCATCTGTGTAATAAGTGGATACTCATTTTTCTACAAATCCAATCGGATGGGACAATACAACCTGAAGGACGTTTTCCGcttgcacacaaaacactctGCCGTGCCCTCTGTAGAGTAAGCCTGCGGTACGGCGTGAAATATGTATGGGCTGGTTGCATCTAGCTCTCCCTCATTTCCTGTCATGTCTGTACTGACGCTATctaatgacataaaatgccacAAATCATAAAAAAGGAGTTTAAGTCAAGTTTCAACTTGTGTAACCTAAACTGAATGGAACAAGTGACTAGCTCTCTGTCATGTAAAGCACAGTGTTACACTTATTACGCTGCTTCTCCATGTTTATTTCtcactctggggacagaaagcatgACCCAATGACTGAAAatgtctgggtgggtcataatgagGCAGaatatgtaaaaacaaaacaaaaaacagtttgCTAAGGGAAATGGGAAACTAGATTCATGTCAACAAGTCAATATTATGTGGTGCTTATTTGGCCAATTTTGGCTGAAACATCCAGTGTGGCTGTTTTactgtttctctctgttgtaTTTCAGTTGTGTTACTGCAAAGAACTTCACACCTTCATTTAGAGATGTGTTGTATATATAAAGCTTAAGAGTAGTATGTGAAATTGCTCACATTGAACTTCACAGTTGTGTGTAACCCACTAAAAGTGTGTGCCTGACTTCATTTCAACCCACAGACAGAGCAACAGTTTCCTGTTTCCAGTTTCCGTGTGAATgtgcatgtatttgttttgtacattgtgtgtatgtatgtgtgtgtgtgtgtgtgctgcattgATGTTAGTGAAAAAGAGGAATGTATACAAGCAACTGTATAATAATGAACTGCTCACTGGAACTTTAATAAGGAAATGTGAGATTTTATCacgtttattattttgttttttaaataaatgacactTTGTTCATGCTCAATGGGATACACACGTTACTTACTATTTAACGTACTTGCAAATACATGGAACAAGGTACTGTCAATTAACAGTAATTTAATGGAGACAGTGTCTAAACACCACAATATCaatgcatgttaaaaaaaacgacattatcggctttttatttcataattgtGTTAAATTAAAGCATTTAAGTCACA

Function

GO: NA

KEGG:

id description
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799654.1 True 2320 mRNA 0.42 5 14127465 14132932

Neighbor

gene id symbol gene type direction distance location
LOC120558590 NA coding downstream 31596 14093285 ~ 14095869 (-)
LOC120558573 NA coding downstream 67568 14056622 ~ 14059897 (-)
cdc37 LOC103374849 coding downstream 75713 14044322 ~ 14051752 (-)
LOC120567316 NA coding downstream 143835 13959135 ~ 13983630 (-)
LOC120558259 NA coding downstream 168494 13948209 ~ 13958971 (-)
LOC120558610 NA coding upstream 8383 14141315 ~ 14146842 (-)
LOC120567413 LOC104965219 coding upstream 17397 14150329 ~ 14179046 (-)
LOC120557653 LOC103366227,LOC103383461 coding upstream 48218 14181150 ~ 14203254 (-)
thumpd1 thumpd1,LOC102789252 coding upstream 88792 14221724 ~ 14224399 (-)
eri2 eri2,LOC106594655 coding upstream 92245 14225177 ~ 14229905 (-)
LOC120558606 NA non-coding downstream 18772 14105951 ~ 14108693 (-)
LOC120558586 NA non-coding downstream 48466 14078317 ~ 14078999 (-)
LOC120558581 NA non-coding downstream 55918 14067848 ~ 14071547 (-)
G4359 NA non-coding downstream 71008 14055443 ~ 14056457 (-)
G4354 NA non-coding downstream 81746 14045360 ~ 14045719 (-)
G4443 NA non-coding upstream 164157 14297089 ~ 14297452 (-)
G4450 NA non-coding upstream 306524 14439456 ~ 14439663 (-)
G4566 NA non-coding upstream 718029 14850961 ~ 14852833 (-)
G4658 NA non-coding upstream 836549 14969481 ~ 14970706 (-)
G4659 actbb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC108244554,LOC106519625 non-coding upstream 838448 14971380 ~ 14973191 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 84955 14018902 ~ 14042510 (-)
G4168 NA other downstream 560199 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 1087185 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 1099072 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 1261426 12865968 ~ 12866039 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 579212 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 768214 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 1293612 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 2212786 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 3279121 17412053 ~ 17421098 (-)

Expression


Co-expression Network