LOC120567413 (LOC104965219)


Basic Information

Item Value
gene id LOC120567413
gene name LOC104965219
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14150329 ~ 14179046 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814376.1
ATGACGCAAGCACGTACGAAAAGACATAACTAGTTGGACTTAACGTAGCTAGTTTGAGGGAGCATTTTGCAAACGAGTTTGTCTTAATTCttttaattaatgaattaatgcaATTACCCGAGCCGAAAGAACTTCAGTACGCgaagaattctttttttaataaccgGTGAATTGTTGAGCCCGGAATGACCACACaagttgctagctagctagctagttgttgataagttagcatgttagctagctgacagcttTAGCCATTCAGTGGCATGCTATGGATGCGTTTACTATAGTTGCGGATGAAGTGGCTTTGGAGGGACTGGATGGAATAACTATTCCCTCTCTTTGGATACGATTGGAAGATAGACAGCCCAAGTTCCCCCTCAAGCTCGACGACTGCACCAAGGAGCTCATCTGGAAGTCACTTATCAGCAACACCGACCTGAAATTCTATCAACTCCCGAAGGAGAGACACGATATTGAGCTGTTTGACAGGTATAAAGACATTGACCCAGAAACAGGCATTGAAAAAACACAGACGTTTTCTGACACACGTAAAGACATCTACCCAGTCCATATTATTCTAGAAAACAAGGATGGGATACAGGGCTCATGTGCACTCTTCAAAGAGAGGAAGGACATCACTGAGCATGTTCGCTCCAAGACCCCATTACTCAACTTGCAGGAAGCTTTGGAAAGATATGGCCGAAAGCTTGTTGTCGTGGCGTCTCAGGCACTGCGATTCAGGACCCTCATTGGAAACGAGAGCGATCCTGATTTGAAACTGAATGACGACTCTTACTGTGTGTTGGAACGAGTAGGCCGAGCTCGATGGCAAGGAGAGCTACAGAGAGATCTGCACGGATGCTCTTTTAAGATCGATGCTCGAAAGTTGCACTACATGAGGAAGGCTCTTGTCAGACATGGACTCCTCAGCATGCAGTCTTATGTCACACGACTAAAGGCAGGATCACAGTcaggacaacaacaacactcCATTCTTCTGCTGCTCAAACGCTTCCATGTAAACAGGAGGACTAAGTATGACATACTGATGGAGTACGTGTCCAGCTTTCTCCAGCAGTCACCTGGTCAGTTTTCCACTATGCTGACACTCAAAGAACTACTTAATGTAGATGAGGGTACTTTTAAACGTGTATTTCAATACATGCGATCTGCCAAGTTGGTTGAGTATTGCCAGttccctctggaggacttaGATCCCGGCGCCGGGCCctgcacaaacaaaaaagGGAATAAAGTGCTTGTGCGCTGTTTGAGACTGTTAAAGCCGTATGCAGGAAAAGGCGTCGCTGAGGATGACGACGATGAGGACGAGGACGAAGAAGATGATGGTGGAGCGAGAAGAAAAGCTCTCCCTTCAGAGGGGCGAATCATGGAGAGCGATGTCCTGTCACAGGCCTATCACATTGTAATATCCTGTGGCCCAAAGGGAATCCCCCAGACGGGTATCGGGTCAAGGATGAACGTCGGTAAGCTGGAATCTCGTATGATCTGCCGCAGGCTGGAGAGGGATGGAGTGATAAAGGGATTCATGGAGGACGAGGGTCGCCAGAGGACTACAAAATTTATCAGCCATAAATGTTTTGGTGTGAGTGAGGAACTCCAACAGTTCGCTAAGGAGCAGGAACGGAAGAAGCTTCTTTACTCTTCTGCACCACAGACGTCAGATGCTGCACCGCCCAGCCCTAAAATGCCGTCAATGTCCACAGCAAAAGAAAAATCCAAAACTCCTGCAGCAAAGaagaaaagcagaaagaaaGCAGGTAGAGGAGGAAACAAAGATGCAGAGGAGGCTAAGCAGACGTGTGGCGATGGAGAAGAGGATACAGCAGATGAAGGCTTGGTTGGAAAGGGAGGTGAAGCAGGAGGAAACGGAACGACGGCAGGGGAGAAAAGCAGTGTGGAAACTAATCAGACACAACCTGAGATCCCCATCATACAACAAACACCAGCTGAAAGTGAAACTCCTGCCTGCAGCAACTCCGCCACCAGTGTGACACCAGACTCTGTGTCCCCTACTCCCACAGCAGAACAAGCTCGAGTTGAGGACGAAGAATCCAACTCCAGTACTGCCAGCACTTTGCCTCAGAGTGAGTCGTTGAACGCAGACGACAACCCGGGGGAGAACAACATTGTGCTCGTTAAAGATGTTTGCAAGCCGCGGgcgaaaagaaaatacaaaaggGCTTATGAGAGATCTCCACCAGCCTTCCTTCCTGCTGCATCACCATTCCATTATCCTAATTCCAGGCTGTCCATTCcagccttccttccttcctccactGTGTCCAGCCCTCCTTTCATCTATCCATTCCCTTCCATCCTCCTACTCCACCACCTCCACTGTCTTGTATCTTGCTTCTTGACCAAGCCCTCTGTTCAgctttgtctttcttttctgtccCTTAGTCTGCAGCTGTCCGAAGAGAATGCCAAAGAACAAGGATCGGGGTCTGACGAGATGAACTACAGCCTTTCTAAAGCCcaaaaaggagagaagaagaagaaagaccAGTTCAAGCCCACGACAGTTCGGGGATTGGGAAAGACCTTTGGATTCCAGCCTAAGATGCATCGCCTGCGTCTTGTTCATAACTTCCTCTGGTACCTGATATACGGGCACCCGCTCAGACACAACTCCACTGACTCCCACTCGACCGGCCTAACACTAGCAGACATGAACGGATTTGATCCTGATGCCAAACACCCAGACAGCCACGAGAAACAGGATCTGAAAGACTCTGTGGACCCCCAAGCTGCAGATTGTAACTTGGATATGGCATCGTCCGGcgatgaagaggaggagctgaAGGATGGATCAACACCTGGTCGCTCTCAGTCTGACCTGAAAGTGTATGCCGATGAAGACTCATGGAAGAAATTCATGCCTCCTGTCCGTGTGCACAAGGAGTTCGGCTGCGGCTGGGCGAGGGTCGGCGACCTGCtcctctgcctgcctctctccatCTTCATTCAGGTCATACAGATCAATTATAAGGTGGAAGGACTGGAGGATTATCTCAACGACCCTGTAAAACAACACCACCTTATTAGAGCGCTGCCCGCCAGAATGAGAAGACAGCTGCTCTTTAGACGgAAATACATATTCTCATTTCATGAGAACCTGCAGAAGTTGGTCTACATGGGTCTGCTGCAGTTTGGTCCTGTGGAGAAGTTCAAGGAGAAAGACCAGGTGTTTTTGTACCTGAGGCGCAATGCCGCCATTGTTGACACCACCAGCGCTGAGCCTCACTACTGGCTGGTCACAGAGTCACAGGACAAACCATTTGAGAGGCGCCAGTACACATTTAACACTGCTGAAGATGTAGAAAACTACTGGTTTGACCTGATGTGTGTCTGCCTCAATACACCACTGGgGGTAATCCGCAATAAGAGAAACGTCACAGACGAAGTAAATGATCCTTCATTTGTTCATGAACGCAACGTGTTCGTAGGATTGGCATACCTGCTCAAgggcagTCGTGAAGCGTGTGATGACGGGTCGATACCAGGAGACGGTAAAGGAGCAGGAGGTCTGGACTCTGAATTCTTTGCTCATCTTAAACGCAACTGGTTGTGGACCAATCACCTCCTTGCTGTCAAAACGACCCCAAGTGGTTTAGAGGCGAAGGAGAATAAAATCCGACTCAAGAGTCTGCTGAGTAAAAATGCTCTCAGGGTTGCGCTTAAAGCCGGGGCAAGTACTACACCTCGTTATGTGACTGCCAAGCGACCACTGACTGCCAAGCGACCACTGATAGAAACTGTTGAGGTGGATATTGAGCCTGCTTCCAGAAACCAGCAGGTGGTCggaggaaagagacagaaaaggaaGAGAAGCAAAAAGGAGGTCGTCAAGGCCCCACGCAAGAAGAAGAAAGAGCCCAAGAAGCGCCTGCCTGCCCACGACGAGGCCGACCACCGAGCCTTGAAGAGGATGACCAGACAGAGAGTCTACTGGTCTGTACAGGAAGACTCCCTGATGATGCTCTGCAGTGTGGCCTCACAACTGCTCAACAGCAAGCTGAAAAGGGCCTTCGTACCTTACTGTCTGGTAAGAGACCTGCTCCAAGCAGAGTTTGAGATATCAATGGATAAAACATCTCTCGCTGTCGGGCGTCGCACACGGTACATCCTCAAAAACCCTCAGACGCTTCTGAACTACAGGATCTGTCTGGCCGAGGTGTACCAGGACAAACCTCTGATGAGACTGTTGGAAGCGAACCAGCCTGCAGATCCAGACAATCCAGAGGATTGTGGGAAAGCGTTCTCCGAGTATGCCAGGCTGCTCAGACAGAAGTTCAGCGCTGTATTTCTGGGCGCTCGTGATATGATCATGCCTGACACGAAACATCAGCTCTTCTCGcgGTTTAAGGTCTCTGCAATAGAAGATGGAAGGCGGGTGGCATGGAAAGACGTTCTCAGCTGCACAGATGACATTCATGGCATAGTGTTACATAACTTGATCCAGAGCACCCTGGCCATGACCAACATTCAGATGAAGTCGTCAAGATCCTTTCAGACCTTCCACATGTACAGTAAGTATAACCAGGAGCTGCTGTGCCAAGTGTTTGTACAATGCAGGAAGAGGGGTCTGGTCAACCGCCGTCGGGTCAATCAGCCGTTTGGGCCGAAGAAGAACCGAGCGCTGCCCATCCTGCCCATGTCCTACCAGCTGTCCCAGTCCTACTACAGGTGTTTTGCGTGGCGTTTTCCACACTCACTGTGCACTGATTCCTTCCGCTTCTTGAGGACTCTAATTAACAATGGGACAGGAGACGAAAGACCCTTCATTGCGTTCTACCATGAACCCGAGAACAGGTCAGAGAACGGCGAGGAATTGGCGAGAAGAACAGGgtcagagagggaaagaaaacgAAGCGAAAGGAAAGAAGATGGAGGTAAACAGAGACTGGCAGCGAGCGAAACAGAGGCACAACCAGAGAAGGCTGACAGTGACTCCacaaaggaaggagagagggaccAAAGTAAAATTGAAGGAGAAGAGATGTTGATGGAGGTGAGCAACGAGAAACCTGAGGCGACAAACAAACCAGATGAACAGAAAGCAGGTTCTAGTGAAGACCCATCCAGCAGAGAGCAGACCGATGATCAGCAGCCCAAAGATGATCCGCCAGGAGTGGCTGCTGCCACAAACGCGGCATCAGAGGAGCCTCCAGATGTATCGGACATGCTGCGCTTCTCTATGGATACTCCCGGTGGAGCCTGTGTGGTCGCCCTCAGCCTGATGTCTCTGGGACTGCTGAGTGTGTACCTGTCCATTCCTAAACAGATGGTGGTGGTGGACAGCAACATGGTGGACAATGATGTTGTCAAGAGCATGGCCGCCGCTCTGGAAGAGGAGGACGATGATGACGACGACGGTGACGActgtgaggggaaaaaaagactggAGGTGAAGTCACATCAAGCGTCTCACACCAACTACCTGATTATGCGCGGATACTGCTTTCCTGGCATAGTAAAAATACGTAACCTCAACACCACTGATAACATCGTGGTGGAGTCGTGTATTATGAGGTTGCAACTGCGCGACACACCTGCTCACAGCGTGTTCAGTAATGAGAACTCTCCACCACTGGACTTGACTAAATGTGGTCCGTCCCTGCTGCCCTCCATCCTCACCTACTCCATccgttcctcctcctcttctcccaaCAGTGTGAAGGAGTGCGAAAGGCGTTTGATTCAGGAAAGAGGATACACTCCTGAGGACATTGAAGCATGTGCTCAGCTCCGGAAGAGTTTAAATGCAGCTGGTGAGAGTGGTTTGGAAATACATAACCTCTATAAGACTCACTTACACCTGGAGGAGCCACAGTCTGGACGCACCAGGAGCCTGCAGCAGTACATGAAGGAGTTACAAGAAGAAGGCCAGGTGTTACAAGTCGGGGGTTTGGGCATACGTTGGGTGCTGATGCAGCACGCTGATCCATGGCTGCTGACCGTAAACTCCAAGCAGTGGTCCCAGTCACGCTTCACATCTGACCGACTCCCCTTTTTGGAGAAACCGCACAACATCCCCTTCATGCGCAAAGGCAGGCGAAGCCGACAGGACTCGGAGGAGCCGCCGGCAAAAAAATTGGCTGTGGAAGGGCAAAAGGGCGAGGACAGACGGGACGCTGAGGGGTTGACGAGTGACTTAACAAGAGAGAAACCTAATGAGGAAGAACAGCTGGAAAAGCAGAAAGAACGGACAGATGATGGAAGTGGAGACACATTGTTCAACatggaggagaagagaaaacagaagccgcctgaagaggaggagggaggaaagcaGATGCAgcctgaagaggaggagggaggaaagcaGATGCAgcctgaagaggaggagggaggaaagcaGATGCAgcctgaagaggaggagggaggaaagcaGATGCAgcctgaagaggaggagggaggaatgcAGATGCAgcctgaagaggaggagggaggaatgcAGATGCAGCctgaagaggagggaggaatgcAGATGCAgcctgaagaggaggagggaggaaagcaGATGCAtcctgaagaggaggagggaggaatgcAGATCCCGCCTGAAAAGGACAGAGAGCAGGAGGCTGGCAAGGAGAAGGTGGAAACTGAGGAAAGACAGGAAAAGAGAGATCGTAGAGTCCGAGCGAGCAGAAGAGCTGATGAAAGAGAGGGACCAACAAGGCCAGCTAACGTTGATAATGGCGAGAACGTGAGTTTCATCAGCCGGCCGTGGCGCATGGTCGACGGCAATCTGAACGATATGTGTAAAGGCATGCTGGAGGCCATTTTGTACAACATCATGTTCCGACCCGGACTCACGCAACAGTCACTGGTGGAGCATTACAAAGATGTGTTGCAGCCGATGGCGGTGCTGGACCTGGTGCAGtctcCTCCACAGGCACTCATCGACATTGGCTGTGTGACGAAGAAAACTCTGGTTAAAGCTCCTAAACCCTCGCTGTTTGCCCGCTCTGTGCCCCAGAGAAGCAGTGAGACCAAAGTGAAGATTGAGGAACCAGACACGGTATTTTATGAGCCCACCATCAGCTGCTGCCTGCGGCTCAGTCAGATGTTACCCAACGAACGTCACTGGAACAATTGCCTACCATGAAAGTAATCAAGCAGTAAGCAGCCTTACCTGGCCTGACCTGACAACATATTAGGTACATAATAAGGCTTTTGAAGTTCATGCCTAAAAAGTTGTGTCAGCGATCAGACCGTTGTGATACAcctaaataatttaattatagaAAAAAGTGTCATGTCATCAGGGTCTCTGACAGATTTCATTTCTGGTTTTACAGAACAGGGATTTCTTTGTACATTGTCttaatggatttttttcttcttatggtTTGTCTTAGAATTCAATTAAGTTATGTGTTCCTTTTTTGTATGCCAGTTATCTTAAACtattaataaaaatatgttACATTACATTCTTGACTTGA

Function

NR:

description
PREDICTED: general transcription factor 3C polypeptide 1-like

GO: NA

KEGG:

id description
K15199 GTF3C1; general transcription factor 3C polypeptide 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814376.1 True 7487 mRNA 0.50 38 14150329 14179046

Neighbor

gene id symbol gene type direction distance location
LOC120558610 NA coding downstream 3487 14141315 ~ 14146842 (-)
LOC120558598 NA coding downstream 17397 14127465 ~ 14132932 (-)
LOC120558590 NA coding downstream 54460 14093285 ~ 14095869 (-)
LOC120558573 NA coding downstream 90432 14056622 ~ 14059897 (-)
cdc37 LOC103374849 coding downstream 98577 14044322 ~ 14051752 (-)
LOC120557653 LOC103366227,LOC103383461 coding upstream 2104 14181150 ~ 14203254 (-)
thumpd1 thumpd1,LOC102789252 coding upstream 42678 14221724 ~ 14224399 (-)
eri2 eri2,LOC106594655 coding upstream 46131 14225177 ~ 14229905 (-)
parn parn,LOC103366231,LOC102788671 coding upstream 63109 14242155 ~ 14252847 (-)
mad1l1 mad1l1 coding upstream 263333 14442379 ~ 14515836 (-)
LOC120558606 NA non-coding downstream 41636 14105951 ~ 14108693 (-)
LOC120558586 NA non-coding downstream 71330 14078317 ~ 14078999 (-)
LOC120558581 NA non-coding downstream 78782 14067848 ~ 14071547 (-)
G4359 NA non-coding downstream 93872 14055443 ~ 14056457 (-)
G4354 NA non-coding downstream 104610 14045360 ~ 14045719 (-)
G4443 NA non-coding upstream 118043 14297089 ~ 14297452 (-)
G4450 NA non-coding upstream 260410 14439456 ~ 14439663 (-)
G4566 NA non-coding upstream 671915 14850961 ~ 14852833 (-)
G4658 NA non-coding upstream 790435 14969481 ~ 14970706 (-)
G4659 actbb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC108244554,LOC106519625 non-coding upstream 792334 14971380 ~ 14973191 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 107819 14018902 ~ 14042510 (-)
G4168 NA other downstream 583063 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 1110049 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 1121936 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 1284290 12865968 ~ 12866039 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 533098 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 722100 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 1247498 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 2166672 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 3233007 17412053 ~ 17421098 (-)

Expression


Co-expression Network