LOC120558610


Basic Information

Item Value
gene id LOC120558610
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14141315 ~ 14146842 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799670.1
AATGCATACTTTCCATATGTgaataaagatgtttctattgTGTGGACGTGACAGGCGTGTAGAGTAAAGATAATAGTTAGCACTCCGATTATGTAAAGTCTCTGAAATTAATCTAGAAGGTGATGTAAAAACAGGGAAATCTGGAGACCGGTAACTACCACGCTTTCACTTTCAAGAATGAAAGGATGTCTGTGAAAAAACGTAGAGAGGATGTGTGATGTGAAAACAGGCGCTGCCAACATTCAATAGAAAACCATTAAACGGAGAGGACTCATTTAATTCCTGACCACCTTTGGGCAACGATTTTTGTTACTTGTTGTACAAAGAAATAACTGGGAATAATGTTTTTCCATTTCATTCTTCTGGTTGTTTCTTTGATGGGTTTCCTGCGCAGCTTCCATGTGTCCAGTTGTGATCCCAACTGTACAAATAAACCTGAGTTCACTCCAACCAGTCTGGTAGTGAAGTATGGTGACCCAACCTCTGCCAGCTGCTCTGTATGTCAGCATGCTTGCCTCGGCAACGGCACCATTTATAATGTGGAGAGCCCTGTTGGAAACTCAACAAAAAACGGAACCACAATTTCATGGACGGTTGACAGACTGACTGAATGGAAAACATCTCCCATGTGCTATTATACCAGCAATACTGGTTACCAGTGTTGTAGCACCCTGACTGTAACTGTGTACCAGCCTCCAGACAGTGTTTCCATCAGCTTTGTAAATCACACTGGGCCGATGTCTGAGGGTCATCAGTACACTCTGCAGTGTACAGTAAAGGACGTTGCTCCTGTTGAAAAGCTCGTTGTGACGTTCTACAGAGGACAGACAGCGCTGGGTCAACCTCAGTCCAACAACAACATAGAGAAGAAACCAGTGACTGAGAGCTTCTCTTTAAACATCACACTCAGTAAAGATGATGATGGAGTCCAGTTCTGGTGTGAAGCAAAGCTAGAACTGGGACCTGATGGACCACAGCGCCCTCCAGTGGTGACGTCAGAAAACATCACTGCCACTGTGTACTATAAACCTCAGCTAGAGGGGTCGTATCTCCTTCCGATCAATGTCACAGAAGGAGATCCTGTACAACTGAACTGCTCGGCCGTGGGAAACCCCAGCCCATCGTACAACTGGACGCTCCCGTTAGTAGCTAAAGAACGCTCTTCTCTCCGCATTGGCAGCGCTCTCTCTATCGACTCTGTAACTTCTGAGGATGAAGGGCAGTACACCTGTTCTGTCAGCAACGATGTGGGGACTGTCACTGTGATGTTTGACGTGCATGTCCAAGGTTTGAAGTCAACCTCAACCACACTGCCGCCAACAACTACCACTTCaaccacaacaaccacaacaaccacaacaaccacATCAACCACAACAACCACACAGACAACAACCGTACCGAACTGCAGCACCAGTAGCATACTGCTTCACAGGTCCATGTGTTTTGTGCTTTTATTCTCTGCTCTGTTTTGAGTTCATTCCTAGAGAACATAAGCGGTTTGTTTCTAGAGCAATAGCAGGTCATATCGTTGCCACTGAACAATATAATAAGACAATAAAAGGTATTTTATCCATGTCCTACATAGCTCACATTTGATGCCAATATCAGTTCTCTAAATACATTGAGAAGGCAGCCCATTGTGTGAGAACGCTTACAATGTACTGTAATACTCATTGTTAACCTTTAGAGTGCATTAGCTTGTAAATGAGCATTGTTTGCCTttctgaaaatacacacacggAACATACTGTAAAAAATGATGTTAGAGTGGATCAATttaattgacaatgaaaaagaaaacagtaagTCTACAGCCATGTTAGCAGCACTGTGAGGCCATACTTGCAAATGCACTTGTAAATGCTAACATCGCTAAGctaacaatgacaatgctaagtAGTACATGTTTAGTAGTAACtatgtttaccatgtttactATCTTAGTTTAGGATGTTAGTATgataacatttgctaatttgcaataaacacaaagtgcagctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799670.1 True 2005 mRNA 0.43 5 14141315 14146842

Neighbor

gene id symbol gene type direction distance location
LOC120558598 NA coding downstream 8383 14127465 ~ 14132932 (-)
LOC120558590 NA coding downstream 45446 14093285 ~ 14095869 (-)
LOC120558573 NA coding downstream 81418 14056622 ~ 14059897 (-)
cdc37 LOC103374849 coding downstream 89563 14044322 ~ 14051752 (-)
LOC120567316 NA coding downstream 157685 13959135 ~ 13983630 (-)
LOC120567413 LOC104965219 coding upstream 3487 14150329 ~ 14179046 (-)
LOC120557653 LOC103366227,LOC103383461 coding upstream 34308 14181150 ~ 14203254 (-)
thumpd1 thumpd1,LOC102789252 coding upstream 74882 14221724 ~ 14224399 (-)
eri2 eri2,LOC106594655 coding upstream 78335 14225177 ~ 14229905 (-)
parn parn,LOC103366231,LOC102788671 coding upstream 95313 14242155 ~ 14252847 (-)
LOC120558606 NA non-coding downstream 32622 14105951 ~ 14108693 (-)
LOC120558586 NA non-coding downstream 62316 14078317 ~ 14078999 (-)
LOC120558581 NA non-coding downstream 69768 14067848 ~ 14071547 (-)
G4359 NA non-coding downstream 84858 14055443 ~ 14056457 (-)
G4354 NA non-coding downstream 95596 14045360 ~ 14045719 (-)
G4443 NA non-coding upstream 150247 14297089 ~ 14297452 (-)
G4450 NA non-coding upstream 292614 14439456 ~ 14439663 (-)
G4566 NA non-coding upstream 704119 14850961 ~ 14852833 (-)
G4658 NA non-coding upstream 822639 14969481 ~ 14970706 (-)
G4659 actbb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC108244554,LOC106519625 non-coding upstream 824538 14971380 ~ 14973191 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 98805 14018902 ~ 14042510 (-)
G4168 NA other downstream 574049 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 1101035 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 1112922 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 1275276 12865968 ~ 12866039 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 565302 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 754304 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 1279702 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 2198876 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 3265211 17412053 ~ 17421098 (-)

Expression


Co-expression Network