LOC120562006


Basic Information

Item Value
gene id LOC120562006
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7866252 ~ 7873600 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805410.1
ATGAGGCTACTTGTGGCATTTCTCTTCTCAGCGTTGGGCTGCGGTCTCGCTGGAGGACAGCTTGTGTCCAAATGTGACCTAATGAAGGCGTTTCAGGACCTGACGGAGGACGTAAAGCAGCAAGGACTGACTATGGACTTAGTGGCTAAGATTGTGTGTCATGCGGAGCTTGCGTCGGGTTTTAACACCAGCGCAGTGACTGAGTCGACTCCCAGGGGCGGACATCACAGTAGGGGGAAGAGGAATGCGGGCATGTTCGAACTGGCAAAGTTTGGGGATCTTACAACACCCCCTGGCCATGGGCATCCTCCACCAGCCACCAAACCTCCACCAGCAACCAAGCCTCAACCAGCCACTGAACATCCACCGCACACAAGGCTTCCACACGTGGTAAGCATTGACCATACAACACGCCCCAGCCGGGTGCGACGGCTCGCCGGCCCTGATTTTGGAAATCTTATAACATCCCCTGGCCAGGGGCATCCTCCAACAGCCACCAAACCTCCACCAGCCACCAAGTCTCCACCGGCAACCAAACCTCCACCGGCCACCAAACTTCCACCGGCAACCAAACCTCCACCGGCCACCAAACTTCCACCGACAACCAAACCTCCACCAGCCACCAAGGCTCCACCAGCCACCAAACCTCCACTGGCCACTAAGGCTCCCCCGGCAACCAAGGCTCCACCGGCAACCAAGCCTCCACCAGCAACCAAACCTTCACCGATCACAAGGCTTCCAGAAGTGGTAAGCAATGACCTTACAACACACCCCATCCGGGTGCGGCGGCTTGCCCGCACTCCATCGCCTTCCAGACCTCCACACGTGGTAAGCAACGAGACTGAGGATGAGCCGGTCTGGACGCTCTACGGCCTTTTCCAACTCAGCAATTACCTGGTCTGCAGCGACGGCACGACTCCGTCACCCAACATCTGTGAGATGGACTGCAACAaCCTTGTTGATGGAGACATACACAACGACATCAGCTGCGTGTTGGAGGTCATCAGCCAACTTATTGAAAATGGTTTTGGGGCGGCCAACCGTGACGAGTTAATAAGAATGGTCAGGCTCATCTTCCAGCCGGAGTGCAGCAATAAAGCCTCCGACTACTTCGCTGAATGCATGTAGTGCCGTAACTATCACTGGAAGGATTACCCTATACGAGTGGTGATTGGCCATCTATGAGTGGTGATTTATGACATAAATAAAGTCAAGCATGTTGCa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805410.1 True 1224 mRNA 0.55 5 7866252 7873600

Neighbor

gene id symbol gene type direction distance location
LOC120565228 NA coding upstream 32745 7827589 ~ 7833507 (+)
LOC120563316 NA coding upstream 48977 7810774 ~ 7817275 (+)
LOC120565219 NA coding upstream 62306 7801177 ~ 7803946 (+)
LOC120563312 NA coding upstream 81999 7777862 ~ 7784253 (+)
LOC120563293 NA coding upstream 100861 7757686 ~ 7765391 (+)
LOC120565283 NA coding downstream 2402 7876002 ~ 7888374 (+)
ifngr1 NA coding downstream 27022 7900622 ~ 7913150 (+)
nup133 nup133 coding downstream 106269 7979869 ~ 8031864 (+)
acta1a actc1a,act2,zgc:86709,LOC105024319,LOC102689871,LOC100534413 coding downstream 164719 8038319 ~ 8049387 (+)
ccsapa NA coding downstream 178923 8052523 ~ 8064500 (+)
G2534 NA non-coding upstream 57888 7752713 ~ 7808364 (+)
LOC120563307 NA non-coding upstream 91326 7770713 ~ 7774926 (+)
G2524 NA non-coding upstream 206157 7659400 ~ 7660095 (+)
G2523 NA non-coding upstream 207229 7658404 ~ 7659023 (+)
G2512 cct4,LOC102790717,LOC104959023 non-coding upstream 262661 7602033 ~ 7603591 (+)
G2545 ltv1 non-coding downstream 40152 7913752 ~ 7917581 (+)
G2561 NA non-coding downstream 89657 7963257 ~ 7965276 (+)
G2563 NA non-coding downstream 97189 7970789 ~ 7971223 (+)
G2562 taf5l non-coding downstream 100673 7974273 ~ 7975034 (+)
G2564 NA non-coding downstream 102069 7975669 ~ 7975881 (+)
G2530 NA other upstream 166712 7699265 ~ 7699540 (+)
G1973 NA other upstream 1331882 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 1429035 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 1463612 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 1949878 5876547 ~ 5916374 (+)
G2557 NA other downstream 67947 7941547 ~ 7948253 (+)
G2590 NA other downstream 216213 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 528115 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 743783 8617383 ~ 8643702 (+)
abcc10 abcc10,LOC107102248 other downstream 796571 8670171 ~ 8702455 (+)

Expression


Co-expression Network