LOC120565283


Basic Information

Item Value
gene id LOC120565283
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7876002 ~ 7888374 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810942.1
ATGAGTCTGCATGTGGCGTTTCTCTTGTCAGCGTTGGGCTGCGGTCTCGCTGGAGGACAGCTTGTGTCCAAATGTGACCTAATGAAGGCGTTTCAGGACCTGACGGAGGACCCAGCCACCAACAGCCACCAAACCTCCACCGGTAACCAATTCTCCACTGGCCACCAAACCTCCACCGGCCACCAATCCTCCACCGGCAACCAATCCTCCACCAGCCACCAAGCCTCCACTGACAACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACAAAGCCTCAACTGACAACCAATCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACCAGCCACCAAGCCTCCACCAGCCACCAAGCCTCCACTGACAACCAATCCTCCACTGGCAACCAATCTCTCCACCAGCCACCAAGCTTCCACAAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACTGCCGCCACCATTCCTCCACACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACCAGCCACCAAGCCTCCACCAGCCACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACAAAGCCTCCACTGACAACCAATCCTCCACTGGCAACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACAAAGCTTCAACTGACAACCAATCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACCAGCCACCAATCCTCCACTAGCAACCAAACCTCCACCAGCCACCAATCCTCCACCATCCACCAAGCCTCCACTGGCAACCAATCCTCCACCGGCCACCAACCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACTGGCAACCAATCCTCCAGCAGCCACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACCAAGCCTCCAGTGACAACCAATCCTCCATTGGCAACCAATCCTCCACCAGCCACCAAACCTCCACCAGCCACCAATCCTCCACCAGCCACCAATCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACAAAGCTTCAACTGACAACCAATCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACCAGCCACCAAGCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACCAGCCACCAAGCCTCCACTGACAACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACAAAGCCTCAACTGACAACCAATCCTCCACTGGCAACCAATCCTCCACCGGCCACCAAGCTTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACCGGCCACCATTCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACCAGCCACCAAGCCTCCACCAGCCACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACAAAGCCTCCACTGACAACCAATCCTCCACTGGCAACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACAAAGCTTCAACTGACAACCAATCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACCAGCCACCAATCCTCCACTAGCAACCAAACCTCCACCAGCCACCAATCCTCCACCATCCACCAAGCCTCCACTGGCAACCAATCCTCCACCGGCCACCAACCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACTGGCAACCAATCCTCCAGCAGCCACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACCAAGCCTCCAGTGACAACCAATCCTCCATTGGCAACCAATCCTCCACCAGCCACCAAACCTCCACCAGCCACCAATCCTCCACCAGCCACCAATCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACCAATCCTCCACCAGCCACCAATCCTCCACTGGCAACTAATCGTCCACCAGCCACCAATCCTCCACTGGCAACCAAACCTCCACCAGCCACCAATCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATTCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACCGGAAACCAATCCTCCACCAGTCACAAATCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACTGGCAACCAATCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCCCCACCAGCCACCAATCCTCCACCGGCCACCAATCCTCCACTGGCAACTAATCGTCCACCAGCCACCAATCCTCCACTGGCAACCAAACCTCCACCAGCCACCAATCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACTGGCAACCAATCCTCCACCGGCCACCAATTCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACCGGAAACCAATCCTCCACCAGTCACAAATCCTCCACCAGCCACCAAGCCTCCACTGGCAACCAATCCTCCACCAGCCACCAAGCCTCCACAGGCAACCAATCCCCCACCAGCCACCAAGCCTCCACCAGCcaccaaacaaacacagaacacaagGCTTCCACAAGACCTTACAACACGCCCCATCCGGGTGCGACGGTTTGCCCGCCCTCCACCGCCTTCCAGACCTCCACACGTAGTAAGCAACGAGACAGAGGACGAGCCGATCTGGACGCTCTACGGTCTTTTCCAGCTCAGCAATTATCTGGTCTGCAGCGACGGCACGACTCCGTCACCCAACATCTGTGAGATGGACTGCAACAaCCTTGTTGATGGAGACATACACAACGACATCAGCTGCGTGATGAAGGTCATCAGCCAACTTAGTGAAAACGGTTACGGGGCGGCCAACCGTGACGAGTTAATAAGGATGATCAGGCTCATCTTCCAGCCGGAGTGCAGCAATAAGAAAGCCTCCGACTACTTCGCTGAATGCATGTAGTGCCGTAACTATCACTGGAAGGATTAACCTATACGAGTGGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810942.1 True 3265 mRNA 0.58 5 7876002 7888374

Neighbor

gene id symbol gene type direction distance location
LOC120562006 NA coding upstream 2402 7866252 ~ 7873600 (+)
LOC120565228 NA coding upstream 42495 7827589 ~ 7833507 (+)
LOC120563316 NA coding upstream 58727 7810774 ~ 7817275 (+)
LOC120565219 NA coding upstream 72056 7801177 ~ 7803946 (+)
LOC120563312 NA coding upstream 91749 7777862 ~ 7784253 (+)
ifngr1 NA coding downstream 12248 7900622 ~ 7913150 (+)
nup133 nup133 coding downstream 91495 7979869 ~ 8031864 (+)
acta1a actc1a,act2,zgc:86709,LOC105024319,LOC102689871,LOC100534413 coding downstream 149945 8038319 ~ 8049387 (+)
ccsapa NA coding downstream 164149 8052523 ~ 8064500 (+)
LOC120558905 NA coding downstream 220969 8109343 ~ 8115194 (+)
G2534 NA non-coding upstream 67638 7752713 ~ 7808364 (+)
LOC120563307 NA non-coding upstream 101076 7770713 ~ 7774926 (+)
G2524 NA non-coding upstream 215907 7659400 ~ 7660095 (+)
G2523 NA non-coding upstream 216979 7658404 ~ 7659023 (+)
G2512 cct4,LOC102790717,LOC104959023 non-coding upstream 272411 7602033 ~ 7603591 (+)
G2545 ltv1 non-coding downstream 25378 7913752 ~ 7917581 (+)
G2561 NA non-coding downstream 74883 7963257 ~ 7965276 (+)
G2563 NA non-coding downstream 82415 7970789 ~ 7971223 (+)
G2562 taf5l non-coding downstream 85899 7974273 ~ 7975034 (+)
G2564 NA non-coding downstream 87295 7975669 ~ 7975881 (+)
G2530 NA other upstream 176462 7699265 ~ 7699540 (+)
G1973 NA other upstream 1341632 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 1438785 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 1473362 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 1959628 5876547 ~ 5916374 (+)
G2557 NA other downstream 53173 7941547 ~ 7948253 (+)
G2590 NA other downstream 201439 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 513341 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 729009 8617383 ~ 8643702 (+)
abcc10 abcc10,LOC107102248 other downstream 781797 8670171 ~ 8702455 (+)

Expression


Co-expression Network