G90112


Basic Information

Item Value
gene id G90112
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 35509887 ~ 35511768 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU121315
tcagttccatcaagtgtcccagtaatctatttcagtgagtcagcatgcacaataccagtggaatgcagccatcactaatggttttgaacacacctgtgctttactatgacaagtcaacatgtctgccgtgaaaaaaggTCTATAGAGGCATTTAACCAAACAATTAACCAACTTTAATGAACTTTAAACAGCTACTGAAATCATCTTCTGGCAAGTCAGGTGCTTGTGGTAAAAGGCAGGGGCGGAACCAGACATTTTCGGGGCTCGCTTAGCCAAAACTTAAGGGGTCCAgggtagggctgtgcaattaattgaatttcgattttggctcccaacgatcaccaaaatagtataaccaagaaaaaaacgattattttgccatgttctgttttgcaagaacaaacttttattttgtcttgtgttctgaatgacacgcgcatgcgcacatccgcccctcccgaagccagtcagggaggcaagtcgtgtgcatatcatccgctggaatttaaaaactcagcgcgagtaaagatggcagcagcgtttggtgagcaaaaaaaggcaaaaccaactcagttgtctgggaacagctaacgttagctaaccctgcggtccctctgccttagCCCCCCCTCTGTAGTATACTGTCTATAGACGTTGTATTCCCCCGACACGCTGTtttcacttactgtttaaaactttttccatcttagtgggggtgcataggcatactgctcaaaaacaacatgaaaaatcatagtaatgttccctcagcatttagttttgttgttaaactgtatgtaaatgagcaggaatcacctgtttcacgtaacgttactctaaggtaccgtctaCGTGCTGGATTTTTCataaggttagctagcaaatgagcccactgacggcgacattattgttgatattttggcacaCTGGTTTGTGGTGAGTGAAcgtgatgtgagatgcacattgtgttatgtctgtggaactgttcattagctgtgtaacgttatgtgtgatatctgtaaagctgaacccACAGTagtaaaactgattttattctgatccaaagactctttctgtgagataaaggacactaacagattataccctggacactatccattatatccaaatgttaatgagtaatcgtgttaaataatcgtgatttcaatattgaccaaaataatcgtgattatttttttttccataatcgagcagccctagtccAGGGGCATATGCTCCCTTAATGGCAGCTATATGCACTATTGATAAGAGAATGCCTAAAATCTCAAcatcatttgggaaaaacatgatagttgccaAGGACATAATCATCATGTGATTAGCCTATGTCCTATTTTCTATCTAATTGTTCTCCAACtttcttcatcattctgaaaccagaacacaaggaGCTGCTGACCACTCTCTACTCAGCCATCATTCAGTCTGTCATCTGCACCTCCATCGCTGTCTGGTTTGGGTCATCCACCAAAGGGGATAGGGCCAGACTGCAACGGACAATTAGGGCTGCCGAGAGGATCATTGGAACTGACCTTCCATCCATCCAGGGTCAGGAAAAGGGCAGCAAAAATCTCTGCAGACCCCTCACATCCTGGTCACAAACTGTTCACCCTCCTTCCCTCTGGTAGGCGATACAGAGACAGCTTCTTTGCCCAAGCAGTCACTCTGTTGAACCCTCAGGAATAGCCCCCACCCTCACACTGAACAAAGTCAATCACcactgttctgctcatctaccTCATGTCTCTTTCAATcctacaattacaatattgttattaatatagtACCATTGCACTGATCTGCCTTGCACTGTACTCATATTTAAATCCTAAAATCTCCGACTattgactgatattgcact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121315 True 1882 lncRNA 0.42 1 35509887 35511768

Neighbor

gene id symbol gene type direction distance location
cnot1 cnot1 coding downstream 235339 35239291 ~ 35274548 (-)
LOC120564426 NA coding downstream 292365 35215167 ~ 35217522 (-)
LOC120564302 NA coding downstream 324029 35182500 ~ 35185858 (-)
LOC120564298 LOC104959125 coding downstream 350701 35156051 ~ 35159186 (-)
LOC120563683 NA coding downstream 354060 35155313 ~ 35155827 (-)
lonp2 lonp2 coding upstream 609620 36121388 ~ 36159736 (-)
il34 il34 coding upstream 649222 36160990 ~ 36218694 (-)
sf3b3 sf3b3 coding upstream 767701 36279469 ~ 36310720 (-)
LOC120563930 aars,LOC102788534 coding upstream 882669 36394437 ~ 36429109 (-)
LOC120564168 arl2bp coding upstream 973980 36485748 ~ 36495032 (-)
LOC120564191 NA non-coding downstream 137926 35369914 ~ 35371961 (-)
G90097 NA non-coding downstream 214372 35294727 ~ 35295515 (-)
G90058 LOC103376141,LOC104955241 non-coding downstream 256555 35148151 ~ 35253332 (-)
LOC120564427 NA non-coding downstream 296238 35211919 ~ 35213649 (-)
G90059 NA non-coding downstream 331489 35152046 ~ 35178398 (-)
G90116 NA non-coding upstream 54224 35565992 ~ 35586502 (-)
G90137 NA non-coding upstream 258142 35769910 ~ 35770175 (-)
G90139 NA non-coding upstream 259204 35770972 ~ 35771273 (-)
G90144 NA non-coding upstream 282262 35794030 ~ 35794246 (-)
G90181 NA non-coding upstream 594825 36106593 ~ 36108261 (-)
G90055 LOC105899468,LOC106591119,LOC106564289,LOC106564211,LOC106594866,LOC106597831 other downstream 338204 35144389 ~ 35171683 (-)
G89928 NA other downstream 831786 34676243 ~ 34678101 (-)
psme3ip1 fam192a other downstream 897725 34595209 ~ 34612162 (-)
LOC120563661 LOC102294989,LOC101481490 other downstream 1063751 34380061 ~ 34446136 (-)
G89873 LOC100698998,LOC102198497,LOC102789814,LOC102294989,LOC101481490 other downstream 1194744 34314531 ~ 34315143 (-)
G90150 NA other upstream 355245 35867013 ~ 35867311 (-)
G90380 anapc13 other upstream 1001194 36512962 ~ 36517927 (-)
LOC120564801 LOC100696185,LOC103368973 other upstream 1006472 36518240 ~ 36521963 (-)
tigara NA other upstream 1331785 36843553 ~ 36852641 (-)
hsbp1b hsbp1,LOC102784925,LOC102222837 other upstream 2298586 37810354 ~ 37815552 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G87223 NA non-coding CI01000015 null 1379681 ~ 1398822 (+)