LOC120564298 (LOC104959125)


Basic Information

Item Value
gene id LOC120564298
gene name LOC104959125
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 35156051 ~ 35159186 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809153.1
ACATCAGCCACCACCATGAGTACGGACTCAGAGATGGCCATTTATGGCAAAGCTGCCATTTACCTTCGGAAGCCAGAAAGGGAGAGAATTGAGGCTCAAAGTGCACCATTTGATGCCACGACTGCCTGCTACGTGGCCGATAAGCAAGAACTGTACTTGAAGGCAAAAATCCTCAAGAAAGAAGGTGACAAAGTCACCGTCGAAATCCTGACCACTAATGAGGTTGGTATCATGAAGACAGTTAAAGAAGCTGACATCTATCCAATGAACcctccagtgaaacactgcccTCCCAAGTATGACAAGATTGAGGACATGGCCATGATGACCCATCTCAATGAAGCATCTGTGCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACCTACTCTGGGTTGTTCTGTGCCACTGTGAACCCCTACAAGTGGCTCCCAGTCATCACAACCAACCCCTACGACTTCCCCATGTGTAGCATGGGTCAGATCACTGTGGCCAGCATTGATGACAAAGTTGAGCTGGAAGCCACTGATAACGCCATTGATATCCTGGGCTTCATTAATGAAGAGAAGGTGATGAACTCCGTGACTGCCCTGGCCAAGGCTATCTATGAGAGGATGTTCTTGTGGATGGTCGTTCGTATTAACCAGATGTTGGACACTAAACAAGCAAGACAGTTCTACATTGGTGTCCTGGATATTGCTGGTTTTGAAATCTTTGACTTCAACACCTTGGAACAGCTGTGCATCAACTTCACCAATGAGAAACTGCAACAGTTCTTCAACCACACCATGTTTGTCCTGGAGCAAGAGGAGTACAAGAAGGAGGGTATTGTCTGGGAGTTCATTGACTTTGGCATGGACTTGGCTGCCTGCATTGAGCTCATTAAAAAGCCCATGGGAATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCCTCAGACACATCCTTCAAGAACAAGCTGTATGACCAGCATCTTGGCAAATCTAAAGCATTTGAGAAGCCTAAGCCCGCCAAAGGCAAGGCTGAGGCCCACTTCTCCCTGGTGCACTATGCtggtaacctgactccgccagatgga

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809153.1 True 1095 mRNA 0.48 8 35156051 35159186

Neighbor

gene id symbol gene type direction distance location
LOC120563683 NA coding downstream 224 35155313 ~ 35155827 (-)
LOC120564297 NA coding downstream 735 35154739 ~ 35155316 (-)
bbs2 bbs2 coding downstream 24914 35111264 ~ 35131137 (-)
b3gnt9 b3gnt9 coding downstream 51154 35096988 ~ 35104897 (-)
LOC120563671 LOC102308624,LOC101464672,LOC100707722 coding downstream 407076 34730082 ~ 34748975 (-)
LOC120564302 NA coding upstream 23314 35182500 ~ 35185858 (-)
LOC120564426 NA coding upstream 55981 35215167 ~ 35217522 (-)
cnot1 cnot1 coding upstream 80105 35239291 ~ 35274548 (-)
lonp2 lonp2 coding upstream 962202 36121388 ~ 36159736 (-)
il34 il34 coding upstream 1001804 36160990 ~ 36218694 (-)
G90039 NA non-coding downstream 95945 35002953 ~ 35060106 (-)
G90038 NA non-coding downstream 98414 35055265 ~ 35057637 (-)
G90030 NA non-coding downstream 100829 34951944 ~ 35055222 (-)
G90028 NA non-coding downstream 133844 34975333 ~ 35022207 (-)
G89925 NA non-coding downstream 417278 34737735 ~ 34738773 (-)
LOC120564427 NA non-coding upstream 52733 35211919 ~ 35213649 (-)
G90097 NA non-coding upstream 135541 35294727 ~ 35295515 (-)
LOC120564191 NA non-coding upstream 210728 35369914 ~ 35371961 (-)
G90112 NA non-coding upstream 350701 35509887 ~ 35511768 (-)
G90116 NA non-coding upstream 406806 35565992 ~ 35586502 (-)
G89928 NA other downstream 477950 34676243 ~ 34678101 (-)
psme3ip1 fam192a other downstream 543889 34595209 ~ 34612162 (-)
LOC120563661 LOC102294989,LOC101481490 other downstream 709915 34380061 ~ 34446136 (-)
G89870 LOC105899468,LOC106564289,LOC105009107,LOC106597831,LOC106591119,LOC103392864,LOC106597772 other downstream 824055 34290803 ~ 34331996 (-)
G90150 NA other upstream 707827 35867013 ~ 35867311 (-)
G90380 anapc13 other upstream 1353776 36512962 ~ 36517927 (-)
LOC120564801 LOC100696185,LOC103368973 other upstream 1359054 36518240 ~ 36521963 (-)
tigara NA other upstream 1684367 36843553 ~ 36852641 (-)
hsbp1b hsbp1,LOC102784925,LOC102222837 other upstream 2651168 37810354 ~ 37815552 (-)

Expression


Co-expression Network