LOC120564302


Basic Information

Item Value
gene id LOC120564302
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 35182500 ~ 35185858 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809154.1
ATGACGCAGCCCACCCCTCCCGACCAACAATCTGCTGTGATATCCTCACAACCAGCATCCATGGCACCAAgggggccccccccccttgGTGAGCTCATCGTTAAAACTCTGGCCTCGTCCAAGGAGCGGAGCGGCGTGTCCGCTGCCGCCCTCAAGAAGGCTCTGGCTGCCGGAGGCTACGATGTGGATAAGAACAATACCAGCGTCAAGACCACCATCAAGAGCCTGGTGGCTAAGTGGACTCTGGTCCAAACAAAGGGGACCGGGGCCTCCGGCTCCTTCAAGATGAATGAGAAGGCTGTCGAGACGAAAGCTAAGAAGCCAACCAAGAAAGCCGCTCCTAAAGCCAAGAACAAGCCCGCAGCCAAGAAACTCACAGCGGCCAAAAAGCCCAAGGCAGCGGCAGCCAagaagccagcagcagcagcaaagaaATCCCCGAAGAAGGCGAAGAAATCCGCAGCGGTTAAGAAAGTGGCCAAGAGTCCCAAAAAGGCTACCAAGAGTCCTAAGAAGGTGGCCAAAAAGTCCACTGCAGCCAAGAAAGCCCCCGCAAAGAAGGCTGCCAAGCCCAAAGTGAAGAAGACAGCAGCACCTAAGAAGTGAGCTGTAATCGGCTCTGAACTAAAGCTCCGACCAAAAGCTCTTTTAAGAGCCAGCCACATCATTTTTAAAGAGCGTTTTCCTGTTGTTTCTTATTGTCATTAACAGCAGACATTTGTGGATGTAAGAGGAGGAAGAGTAATTCCTAGTTCAATGCTTATTCATTTGAAGTTCTTACATATTCAATATCCCAATTAAGTAGGCTATTTTTGGTTTAATTAGGTTTaatttataaatatttaaaccTACGGTAATTTAGAGGAGGTAAATGAAGTAGGAAAAGTATGACGTAGCCTAGGCTAAATGGGCTTTATTTAGCCTACTGCTGTATCATACAGTAGGCTATTATTTATCTGTGAATTTAATACATAAcgtgaatttaataacaaaattcCATATTCAGACTCAGGCCAgcctatttttttattattacatatttGATAGCTTGTTTAAAATCATGCAGAGTCAAGGTTAGCAAAATGTGACGTTTTGACTTAATAGTGCTTAAAAAACGCACTTCAAAAGGTGCAGTAGCAGTTTCAGTTATAGATAGCACAATGTTACCATCCCAGTGTTTCTGAAGACATCTTATAGATATGATGGTATTTCAAAACCGAGATGcatgtgtacttttacttaacattgtttttaaaaactCAGATGcatgtgtacttttacttaacattgtttttaaaaactCAGATGcatgtgtacttttacttaacattgttttattttaacaaatgtgAAGCTATGTATGAGTTAAGGAAGATAACCAACAAATTAGTGCCTGTCATGCACGGTAAGATAACATAATTGTGACGACCAGAGGGTGCTGTTGGACGAGATAAGATGTGGCCCCTTAAGAGGGGCTCGTTGGGGCAAACCAGTACATTGTTTTAACCTTATGGGAAGTCACTAACAGTGCCTATAAGTGTGGGTAGGTTTTTCAAAGCACACTTGATTAACGAGGTTGTCCCATCACCCAACTCAATACATTGCTGCCAATTGCTTAAGCAGAGCTTTTTGAAATATTCACATACAAGTATGTCACAACAGCCACACCACATTACAATTAAAATCAATTTTGTCTCTGACTCTGGAGTCAGTGAATGAGACCACACTATGTCCCCAAATAAAACCTTCAGTCCTGGATGTATGGCTTCCATATGGATGAATTGTGTAATACATTACAAGAATACAGTCATACAGAAATGCTGCTGCATCCAAACCGTCCTTTTGTGTGGAAACCAACTAAGCAGAAATCATATGAATAGTGGAAAGTGTATCTATAAGTAGCCTACCATTACTTAATCAGTGTGGTGTAGCCTACTCTTAACATAGACTTGCTTAATCACCACTGTCACTTTACCTTTAAACTTTTGTCTCCATATGCTTTTGTATAGTTTCtatttataacttttattttacttatctTCGTTTGATAtacatgtaggctactgtatataaCCTACAtcatatgacatttttttttactttctctatttatttgtactatttctgtctttgtgctgcTGTAACCGCTCTATTCAATCAATAAAGGGGGTAAATAGGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809154.1 True 2183 mRNA 0.41 2 35182500 35185858

Neighbor

gene id symbol gene type direction distance location
LOC120564298 LOC104959125 coding downstream 23314 35156051 ~ 35159186 (-)
LOC120563683 NA coding downstream 26673 35155313 ~ 35155827 (-)
LOC120564297 NA coding downstream 27184 35154739 ~ 35155316 (-)
bbs2 bbs2 coding downstream 51363 35111264 ~ 35131137 (-)
b3gnt9 b3gnt9 coding downstream 77603 35096988 ~ 35104897 (-)
LOC120564426 NA coding upstream 29309 35215167 ~ 35217522 (-)
cnot1 cnot1 coding upstream 53433 35239291 ~ 35274548 (-)
lonp2 lonp2 coding upstream 935530 36121388 ~ 36159736 (-)
il34 il34 coding upstream 975132 36160990 ~ 36218694 (-)
sf3b3 sf3b3 coding upstream 1093611 36279469 ~ 36310720 (-)
G90059 NA non-coding downstream 4102 35152046 ~ 35178398 (-)
G90039 NA non-coding downstream 122394 35002953 ~ 35060106 (-)
G90038 NA non-coding downstream 124863 35055265 ~ 35057637 (-)
G90030 NA non-coding downstream 127278 34951944 ~ 35055222 (-)
G90028 NA non-coding downstream 160293 34975333 ~ 35022207 (-)
LOC120564427 NA non-coding upstream 26061 35211919 ~ 35213649 (-)
G90097 NA non-coding upstream 108869 35294727 ~ 35295515 (-)
LOC120564191 NA non-coding upstream 184056 35369914 ~ 35371961 (-)
G90112 NA non-coding upstream 324029 35509887 ~ 35511768 (-)
G90116 NA non-coding upstream 380134 35565992 ~ 35586502 (-)
G90055 LOC105899468,LOC106591119,LOC106564289,LOC106564211,LOC106594866,LOC106597831 other downstream 10817 35144389 ~ 35171683 (-)
G89928 NA other downstream 504399 34676243 ~ 34678101 (-)
psme3ip1 fam192a other downstream 570338 34595209 ~ 34612162 (-)
LOC120563661 LOC102294989,LOC101481490 other downstream 736364 34380061 ~ 34446136 (-)
G89870 LOC105899468,LOC106564289,LOC105009107,LOC106597831,LOC106591119,LOC103392864,LOC106597772 other downstream 850504 34290803 ~ 34331996 (-)
G90150 NA other upstream 681155 35867013 ~ 35867311 (-)
G90380 anapc13 other upstream 1327104 36512962 ~ 36517927 (-)
LOC120564801 LOC100696185,LOC103368973 other upstream 1332382 36518240 ~ 36521963 (-)
tigara NA other upstream 1657695 36843553 ~ 36852641 (-)
hsbp1b hsbp1,LOC102784925,LOC102222837 other upstream 2624496 37810354 ~ 37815552 (-)

Expression


Co-expression Network