G106183 (aldob,LOC104946054)


Basic Information

Item Value
gene id G106183
gene name aldob,LOC104946054
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19331708 ~ 19337571 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142607
TTGGTCACTTAATTTATTTCCAGTTATTTTAACTGAGTAGACAAACAGTAGTTCAACATTATAATGGACGTCTTCTCCTGGTGTTGGTAGTCTTAGGGAAAAGGGAAATCCAGCAGAGCCATTTCAGGTCATATTTTGTCCATTTgcatttggttttatttttaacgTTCACAGTATTTAATAGACGTAGCTGGCTGTGTACAGAGACTGCATGGAGGCCTGGTCAGCTGAGCCGGAGGGCTTGTACTCTCCTTTGGCAGCCAGGCCATTGATCTGAAGAGAGCAACAGAGGGAGAAAGTTAGGTCAAAGTCTGAGTGTTAATGATCAGCCTGGGCCACATTAGTGCGGGACTGAATAGACAAAAAGCTTGTTAAAATCAATAATTTACCAGTCAGAATAAAGTTAGGTAATACAAGGTAAGAGTCATTTAGGAGCTAGTTATATTCACAGTCCACAACTACAAATTGATAAGTGGGTATAATATATCAGTGTCTATTCTGTATTAGTCATGCCCAAGACTAACCTTGGCCCTGGTTTTGAATGCTTCTTGTGCAGCTGCCTTGTTGGCAGCTTTGCCCTGCCAGGCTGCAAGAGCAGAGGCCTGGAGTGCACGGCCGTAAGAGAAGGTCAGCTTCCAGGGGCGATGGAGAGGCACCTGGTTAATGGCGTTCAGGTTGCGGGATGCCTCCTCCTCACTCTGGCCTCCAGACAGGAAACAAATGCCGGCACAGAAGAGGGGACGGTGCGCCTCAGAGCGGTCACGGTGGCCATGCCAACCTCCTGAGGGGTGAACTTCTTAGTGCAGGAGTGTCCAGCAGTGACCATGTTGGGCTTCAGCAGAGTGCCCTCCAGGTACACGTGGTGATCGGACAGAGCCTTGTACACAGCAGCCAGAACCTAAAACATGGAGAGGCAGATTTATTACTGCACATGCTTTAAAATATCCGACGGGAAAATTACAGCTGGTGGTTTGGCTGACAAAGCCAAAGATGATGAACCAACCTTTTCTGTGACGTACTGGCAGCGCAGCAGGTCATGGTCTCCGTCAGGCAGGATCTCTGGCTCCACAATAGGCACCAGGCCATTCTGtggcAGATACTGGCATATCTGGCAAGGACATTGGCATTCTCTGCAATGGCGAGAGCTGATGGGCAGCTATCTGAGATCTTGAGCACACACCTCCACTTGGCAAAGTCACAACCGTCCTTCTTATACTGGGCACAGCGCTCTGAGAGGCCATCGAGACCTAAAGAAAAACCAGCCACAGAATGTTGGTATGCTGCCGTGCTGAAGCGTGTAAAGATTTAGCAATAAAGAAGGCTTGCACTTCTGGGCTTTGAATTAGAATAGATATACAAGCCATTTTCACCTTGTGTGGTGGTCTCTCCATCGGTTCCGTTTAGACCAGCTGTGCCTTTGTCCACCTGATGCCGACGACAATGCCCTGATCCTTGATGACTTGGGGGAAGAGCTTGCCGCTGTTTGATTTCTGGTAGAGAGTCTCATGGAAGAAGATGACCCCACCCACACAGTTGGAGATTAAGGGGTCAGCGGAGAAGAGGAGGTCGCGGAAGTAGCGACGGTTCTCCTCGTTGTTTTCAACATTGATTTTCTGGAGACGCTTTCCCATGGTTACCCGTTGATTCATCTGCAGCCAGGATTCCCTTTCCTGGAGCCACGATCCTCTGAGCAATGTCAGAGAGCTCCTTCTTCTGCTCCGGAGAGAGGGATGGGAACTGATGAGTCATCCTAGAGGAGAGAAACTAGTTATTCCATAGTTGGTCCAAACTAAAGTTTGAGAAAGATTAAATATTGTTCCAAATCAAAACACAAAGAACATCTGACTTCCTGCCTCTCTTGCACCACCTCTGTAAATATTTGGCTTGAATGGTTGAACTTTGGCCTTTAAAACAGATCAGGTTCTACCTTTAACAGAAGTTCATAGTTCACTCAAAGTGGTTGACTGCATGAcgttttccaaaactttctgcagaagaccccccacacacacacttaaaaaaacagcataaCATGAAGGCCAATAATTCAAATCACGAGCataatttgcacacacacacacatatacacaca

Function

symbol description
aldob Predicted to enable fructose-1-phosphate aldolase activity and fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be located in cytoplasm and microtubule organizing center. Predicted to be active in cytosol. Is expressed in several structures, including EVL; alar plate midbrain region; digestive system; intestinal bulb primordium; and midbrain. Human ortholog(s) of this gene implicated in hereditary fructose intolerance syndrome and type 2 diabetes mellitus. Orthologous to human ALDOB (aldolase, fructose-bisphosphate B).

NR:

description
PREDICTED: fructose-bisphosphate aldolase B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142607 True 2092 lncRNA 0.47 6 19331708 19337571

Neighbor

gene id symbol gene type direction distance location
LOC120566244 NA coding upstream 1021 19326915 ~ 19330687 (+)
tmco6 tmco6 coding upstream 5206 19319328 ~ 19326502 (+)
tcof1 NA coding upstream 13418 19312750 ~ 19318290 (+)
cdx1a NA coding upstream 119825 19208629 ~ 19211883 (+)
hmgxb3 LOC104941520 coding upstream 171461 19146825 ~ 19160247 (+)
LOC120566246 LOC103365654,LOC104946023,LOC107375602 coding downstream 9896 19347467 ~ 19351968 (+)
LOC120567394 LOC104945954 coding downstream 49016 19386587 ~ 19394581 (+)
prpf19 prpf19 coding downstream 57324 19394895 ~ 19400485 (+)
tcirg1b tcirg1,LOC103471301,LOC103135496 coding downstream 64001 19401572 ~ 19411053 (+)
mrpl18 mrpl18,LOC102790108 coding downstream 74219 19411790 ~ 19413992 (+)
LOC120566719 NA non-coding upstream 36628 19294298 ~ 19295080 (+)
G106149 NA non-coding upstream 50458 19220073 ~ 19281250 (+)
G106148 LOC102076833,LOC106676291 non-coding upstream 51226 19274688 ~ 19280482 (+)
G106153 NA non-coding upstream 73969 19253554 ~ 19257739 (+)
G106147 LOC102076833,LOC102195147,LOC102293447,LOC102077094 non-coding upstream 111716 19219553 ~ 19219992 (+)
G106199 NA non-coding downstream 78776 19416347 ~ 19416775 (+)
G106218 NA non-coding downstream 178387 19515958 ~ 19602093 (+)
LOC120566488 NA non-coding downstream 507268 19844839 ~ 19848278 (+)
G106351 NA non-coding downstream 603367 19940938 ~ 19941715 (+)
LOC120566743 NA non-coding downstream 613186 19950757 ~ 19954963 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other upstream 361762 18963934 ~ 18969946 (+)
gabra6a gabra6,LOC102779400,LOC100710435,LOC102294139 other upstream 1431977 17890170 ~ 17899731 (+)
G105677 NA other upstream 1646009 17682919 ~ 17685699 (+)
LOC120567259 LOC106925651,LOC106940816,LOC108240559,LOC106591805,LOC102211808,LOC100691901,LOC106613062 other upstream 1867486 17458247 ~ 17464222 (+)
LOC120566324 LOC107089033,LOC103135614,LOC106925651,LOC106940816 other upstream 1971446 17357508 ~ 17360262 (+)
G106237 spock1 other downstream 267269 19604840 ~ 19652474 (+)
LOC120566323 LOC102781894,LOC101481808 other downstream 691292 20028863 ~ 20061338 (+)
G106465 LOC104955902 other downstream 1014150 20351721 ~ 20352167 (+)
hrh2a LOC103354784,LOC104948895 other downstream 1597158 20934729 ~ 20947415 (+)
selenoh selenoh other downstream 1942116 21279687 ~ 21283229 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location