G106147 (LOC102076833,LOC102195147,LOC102293447,LOC102077094)


Basic Information

Item Value
gene id G106147
gene name LOC102076833,LOC102195147,LOC102293447,LOC102077094
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19219553 ~ 19219992 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142550
GTCCCGTTGGTTAAGGTGCAGTTAATGTGTATGAAGCCTGTGGGAAAGAAACAGATCAATGACTGATCAGTGTCACAAACttcaaactgtcaaataatgttCTCACTCACCACATGTAGATATAGTCTTTTCTTCTGAGACATTACTGACTTGATTCCTGACTGAGCAGACCAGTCGTCCTGAGACCTTTTGTTTCAGAGTGATGTTGTTAGTCTCAGTATTTCCAGAGAGGAGCTCAGCGTCTGTCAGTGTGCGTCCATCCAGAGTCCAGCTGTACTGAGGACTGTCCCCTCCCTCAGAGGAGCAGGACACCCTCATCTCTCCCTGGGACAGACACTCAGAGACCAGCAGGACAGAGGACACAGGAGCTGAAGGAAACACACTCAGATGACTTTTCATATTAACAGAATCTTGGTCATTTTATACAGTTTCTAATACAG

Function

NR:

description
PREDICTED: hepatocyte cell adhesion molecule-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142550 True 440 lncRNA 0.45 1 19219553 19219992

Neighbor

gene id symbol gene type direction distance location
cdx1a NA coding upstream 7670 19208629 ~ 19211883 (+)
hmgxb3 LOC104941520 coding upstream 59306 19146825 ~ 19160247 (+)
LOC120567307 LOC104965705 coding upstream 75829 19138154 ~ 19143724 (+)
cd74a NA coding upstream 85584 19129307 ~ 19133969 (+)
LOC120567306 ndst1,LOC104927060 coding upstream 91235 19091298 ~ 19128318 (+)
tcof1 NA coding downstream 92758 19312750 ~ 19318290 (+)
tmco6 tmco6 coding downstream 99336 19319328 ~ 19326502 (+)
LOC120566244 NA coding downstream 106923 19326915 ~ 19330687 (+)
rnf20 rnf20 coding downstream 116783 19336775 ~ 19346966 (+)
LOC120566246 LOC103365654,LOC104946023,LOC107375602 coding downstream 127475 19347467 ~ 19351968 (+)
G106120 pdgfrb non-coding upstream 39916 19178938 ~ 19179637 (+)
G106080 rbm22 non-coding upstream 143980 19073982 ~ 19075573 (+)
G106006 NA non-coding upstream 299244 18915265 ~ 18920309 (+)
LOC120566919 LOC106517507,LOC108240586,LOC103471261,LOC106920872,LOC106964884 non-coding upstream 497793 18712500 ~ 18721760 (+)
G105985 NA non-coding upstream 545084 18665991 ~ 18674469 (+)
G106149 NA non-coding downstream 81 19220073 ~ 19281250 (+)
G106153 NA non-coding downstream 33562 19253554 ~ 19257739 (+)
G106148 LOC102076833,LOC106676291 non-coding downstream 54696 19274688 ~ 19280482 (+)
LOC120566719 NA non-coding downstream 74306 19294298 ~ 19295080 (+)
G106183 aldob,LOC104946054 non-coding downstream 111716 19331708 ~ 19337571 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other upstream 249607 18963934 ~ 18969946 (+)
gabra6a gabra6,LOC102779400,LOC100710435,LOC102294139 other upstream 1319822 17890170 ~ 17899731 (+)
G105677 NA other upstream 1533854 17682919 ~ 17685699 (+)
LOC120567259 LOC106925651,LOC106940816,LOC108240559,LOC106591805,LOC102211808,LOC100691901,LOC106613062 other upstream 1755331 17458247 ~ 17464222 (+)
LOC120566324 LOC107089033,LOC103135614,LOC106925651,LOC106940816 other upstream 1859291 17357508 ~ 17360262 (+)
G106237 spock1 other downstream 384848 19604840 ~ 19652474 (+)
LOC120566323 LOC102781894,LOC101481808 other downstream 808871 20028863 ~ 20061338 (+)
G106465 LOC104955902 other downstream 1131729 20351721 ~ 20352167 (+)
hrh2a LOC103354784,LOC104948895 other downstream 1714737 20934729 ~ 20947415 (+)
selenoh selenoh other downstream 2059695 21279687 ~ 21283229 (+)

Expression


Co-expression Network