G106149


Basic Information

Item Value
gene id G106149
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19220073 ~ 19281250 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142555
tctatttataccactaaatTTGCAAAAGAGTGATTTACCTTGAATGGTCAACTGTAGAGTCCGCTGCTCTGATATCTTTCCATCTGAATCAAAGATTACAAGTTTATATTCACCTCCATCAGTCCAGCTCAGGTTGTTGATCCTAAATGTTCCATTACTGGGAGTAAAGAAGGATCTGTTTGCTATCGTATTAGACACAATCACATTCTTTATCACTATgagtattgttgttgttgttcttgtatctgttttggttgttgttttgaTTGACCATGTGTATCTAGATATTTCTGAGGCATTGTCCATCAGCTGGAGGACCACAGTTCCTCCCAAAGCTCCATAACACTGAGCTCCATTCTGTCGGCCATCACAGTAGGTTTCGACACCTGGAAAGTTTCGgggaaaaaatgtaaacatgacaATTATGATCATTTAATTTCTATAATATGAATTACCATGACAACGTTTTATGCATAACCAAATACTGATCTAAAGCCAACTACAGTGGGTTTGGTACAGTTGTGTAACTCTCGGACCACATTATGCACTCATGCTGTGGTTTGGGTTTTTTACACAgacacaattttatttttaaataaaatgtgtgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142555 True 610 lncRNA 0.37 3 19220073 19281250

Neighbor

gene id symbol gene type direction distance location
cdx1a NA coding upstream 8190 19208629 ~ 19211883 (+)
hmgxb3 LOC104941520 coding upstream 59826 19146825 ~ 19160247 (+)
LOC120567307 LOC104965705 coding upstream 76349 19138154 ~ 19143724 (+)
cd74a NA coding upstream 86104 19129307 ~ 19133969 (+)
LOC120567306 ndst1,LOC104927060 coding upstream 91755 19091298 ~ 19128318 (+)
tcof1 NA coding downstream 31500 19312750 ~ 19318290 (+)
tmco6 tmco6 coding downstream 38078 19319328 ~ 19326502 (+)
LOC120566244 NA coding downstream 45665 19326915 ~ 19330687 (+)
rnf20 rnf20 coding downstream 55525 19336775 ~ 19346966 (+)
LOC120566246 LOC103365654,LOC104946023,LOC107375602 coding downstream 66217 19347467 ~ 19351968 (+)
G106147 LOC102076833,LOC102195147,LOC102293447,LOC102077094 non-coding upstream 81 19219553 ~ 19219992 (+)
G106120 pdgfrb non-coding upstream 40436 19178938 ~ 19179637 (+)
G106080 rbm22 non-coding upstream 144500 19073982 ~ 19075573 (+)
G106006 NA non-coding upstream 299764 18915265 ~ 18920309 (+)
LOC120566919 LOC106517507,LOC108240586,LOC103471261,LOC106920872,LOC106964884 non-coding upstream 498313 18712500 ~ 18721760 (+)
LOC120566719 NA non-coding downstream 13048 19294298 ~ 19295080 (+)
G106183 aldob,LOC104946054 non-coding downstream 50458 19331708 ~ 19337571 (+)
G106199 NA non-coding downstream 135097 19416347 ~ 19416775 (+)
G106218 NA non-coding downstream 234708 19515958 ~ 19602093 (+)
LOC120566488 NA non-coding downstream 563589 19844839 ~ 19848278 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other upstream 250127 18963934 ~ 18969946 (+)
gabra6a gabra6,LOC102779400,LOC100710435,LOC102294139 other upstream 1320342 17890170 ~ 17899731 (+)
G105677 NA other upstream 1534374 17682919 ~ 17685699 (+)
LOC120567259 LOC106925651,LOC106940816,LOC108240559,LOC106591805,LOC102211808,LOC100691901,LOC106613062 other upstream 1755851 17458247 ~ 17464222 (+)
LOC120566324 LOC107089033,LOC103135614,LOC106925651,LOC106940816 other upstream 1859811 17357508 ~ 17360262 (+)
G106237 spock1 other downstream 323590 19604840 ~ 19652474 (+)
LOC120566323 LOC102781894,LOC101481808 other downstream 747613 20028863 ~ 20061338 (+)
G106465 LOC104955902 other downstream 1070471 20351721 ~ 20352167 (+)
hrh2a LOC103354784,LOC104948895 other downstream 1653479 20934729 ~ 20947415 (+)
selenoh selenoh other downstream 1998437 21279687 ~ 21283229 (+)

Expression


Co-expression Network